Functional clusters
Information
- Type InterPro
- Description Transcriptional corepressor LEUNIG-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_362 | 5 | CH_aag_297 | 2 | 2 | 0.00024077 |
| Amborella trichopoda | AmTr_v1.0_scaffold00037 | 5 | CH_atr_667 | 2 | 2 | 0.000794407 |
| Camellia sinensis var. sinensis | Chr11 | 5 | CH_camsi_337 | 4 | 12 | 0.00000000214681 |
| Coffea canephora | chr11 | 5 | CH_ccan_204 | 3 | 20 | 0.000000533208 |
| Coffea canephora | chr6 | 5 | CH_ccan_572 | 2 | 3 | 0.000268309 |
| Ceratophyllum demersum | 1 | 5 | CH_cde_461 | 2 | 2 | 0.000473878 |
| Davidia involucrata | GWHABJS00000003 | 5 | CH_din_832 | 2 | 2 | 0.000750188 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_551 | 3 | 18 | 0.000129567 |
| Magnolia biondii | Chr01 | 5 | CH_mbi_546 | 3 | 4 | 0.00000169802 |
| Malus domestica | Chr05 | 5 | CH_mdo_285 | 4 | 5 | 0.00000000111638 |
| Medicago truncatula | chr4 | 5 | CH_mtr_67 | 8 | 10 | 3.60599e-23 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_726 | 2 | 2 | 0.000528123 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_727 | 2 | 2 | 0.000528123 |
| Petunia axillaris | Peaxi162Scf00223 | 5 | CH_pax_718 | 2 | 2 | 0.000703556 |
| Punica granatum | NC_045129.1 | 5 | CH_pgr_294 | 3 | 4 | 0.00000189153 |
| Physcomitrium patens | Chr02 | 5 | CH_ppa_68 | 3 | 6 | 0.00000112608 |
| Sapria himalayana | scaffold61_3099142 | 5 | CH_shi_499 | 2 | 2 | 0.000343083 |
| Sapria himalayana | scaffold28_7511268 | 5 | CH_shi_500 | 2 | 2 | 0.000343083 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_271 | 5 | CH_tpr_19 | 7 | 9 | 4.22506e-19 |
| Vitis vinifera | chr4 | 5 | CH_vvi_386 | 3 | 4 | 0.00000194368 |
| Zea mays | 3 | 5 | CH_zma_499 | 2 | 2 | 0.000511313 |
| Anthoceros agrestis | Sc2ySwM_362 | 6 | CH_aag_297 | 2 | 2 | 0.00024077 |
| Amborella trichopoda | AmTr_v1.0_scaffold00037 | 6 | CH_atr_667 | 2 | 2 | 0.000794407 |
| Camellia sinensis var. sinensis | Chr11 | 6 | CH_camsi_337 | 4 | 12 | 0.00000000214681 |
| Coffea canephora | chr11 | 6 | CH_ccan_204 | 3 | 20 | 0.000000533208 |
| Coffea canephora | chr6 | 6 | CH_ccan_572 | 2 | 3 | 0.000268309 |
| Ceratophyllum demersum | 1 | 6 | CH_cde_461 | 2 | 2 | 0.000473878 |
| Davidia involucrata | GWHABJS00000003 | 6 | CH_din_832 | 2 | 2 | 0.000750188 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_551 | 3 | 18 | 0.000129567 |
| Magnolia biondii | Chr01 | 6 | CH_mbi_546 | 3 | 4 | 0.00000169802 |
| Malus domestica | Chr05 | 6 | CH_mdo_285 | 4 | 5 | 0.00000000111638 |
| Medicago truncatula | chr4 | 6 | CH_mtr_67 | 8 | 10 | 3.60599e-23 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_726 | 2 | 2 | 0.000528123 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_727 | 2 | 2 | 0.000528123 |
| Petunia axillaris | Peaxi162Scf00223 | 6 | CH_pax_718 | 2 | 2 | 0.000703556 |
| Punica granatum | NC_045129.1 | 6 | CH_pgr_294 | 3 | 4 | 0.00000189153 |
| Physcomitrium patens | Chr02 | 6 | CH_ppa_68 | 3 | 6 | 0.00000112608 |
| Sapria himalayana | scaffold61_3099142 | 6 | CH_shi_499 | 2 | 2 | 0.000343083 |
| Sapria himalayana | scaffold28_7511268 | 6 | CH_shi_500 | 2 | 2 | 0.000343083 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_271 | 6 | CH_tpr_19 | 7 | 9 | 4.22506e-19 |
| Vitis vinifera | chr4 | 6 | CH_vvi_386 | 3 | 4 | 0.00000194368 |
| Zea mays | 3 | 6 | CH_zma_499 | 2 | 2 | 0.000511313 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |