Functional clusters

Information

  • Type InterPro
  • Description Rhodanese-like domain-containing protein STR17/STR18/HARC1-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_8 5 CH_aly_298 3 6 0.00000130669
Ceratophyllum demersum 3 5 CH_cde_363 2 2 0.000236939
Daucus carota DCARv2_Chr5 5 CH_dca_555 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_645 2 2 0.000134617
Lactuca sativa Lsat_1_v8_lg_2 5 CH_lsa_803 2 3 0.000462586
Nelumbo nucifera chr5 5 CH_nnu_469 2 2 0.000144505
Pisum sativum chr2LG1 5 CH_psa_278 3 5 0.000000816191
Papaver somniferum NC_039358.1 5 CH_pso_1019 2 3 0.000202761
Sechium edule LG10 5 CH_sed_415 2 2 0.000214026
Vitis vinifera chr4 5 CH_vvi_222 3 3 0.0000000086787
Arabidopsis lyrata scaffold_8 6 CH_aly_298 3 6 0.00000130669
Ceratophyllum demersum 3 6 CH_cde_363 2 2 0.000236939
Daucus carota DCARv2_Chr5 6 CH_dca_555 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_645 2 2 0.000134617
Lactuca sativa Lsat_1_v8_lg_2 6 CH_lsa_803 2 3 0.000462586
Nelumbo nucifera chr5 6 CH_nnu_469 2 2 0.000144505
Pisum sativum chr2LG1 6 CH_psa_278 3 5 0.000000816191
Papaver somniferum NC_039358.1 6 CH_pso_1019 2 3 0.000202761
Sechium edule LG10 6 CH_sed_415 2 2 0.000214026
Vitis vinifera chr4 6 CH_vvi_222 3 3 0.0000000086787

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001