Functional clusters
Information
- Type InterPro
- Description Protein PELPK-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_551 | 2 | 2 | 0.000198013 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 5 | CH_amhyb_413 | 2 | 2 | 0.000505051 |
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_367 | 3 | 28 | 0.000126208 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_381 | 2 | 2 | 0.0000286492 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 5 | CH_bvu_514 | 2 | 3 | 0.000745074 |
| Camellia sinensis var. sinensis | Chr1 | 5 | CH_camsi_5 | 16 | 19 | 1.05117e-49 |
| Cannabis sativa | NC_044377.1 | 5 | CH_cansat_220 | 3 | 7 | 0.000000226346 |
| Capsicum annuum | PGAv.1.6.scaffold525 | 5 | CH_can_67 | 7 | 12 | 7.13694e-19 |
| Cicer arietinum L. | Ca_LG6_v3 | 5 | CH_car_75 | 3 | 4 | 0.000000145376 |
| Citrus clementina | scaffold_7 | 5 | CH_ccl_224 | 4 | 5 | 0.00000000173859 |
| Citrus clementina | scaffold_8 | 5 | CH_ccl_98 | 6 | 9 | 0.00000000000000147406 |
| Carpinus fangiana | Cfa01 | 5 | CH_cfa_275 | 3 | 5 | 0.00000086023 |
| Carya illinoinensis | Chr01 | 5 | CH_cil_85 | 6 | 6 | 6.18343e-17 |
| Citrullus lanatus | CG_Chr09 | 5 | CH_cla_106 | 3 | 3 | 0.000000118051 |
| Capsella rubella | scaffold_6 | 5 | CH_cru_658 | 2 | 2 | 0.000731154 |
| Cucumis sativus L. | chr4 | 5 | CH_csa_465 | 2 | 2 | 0.000500856 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_96 | 4 | 4 | 0.00000000000948749 |
| Eucalyptus grandis | Chr07 | 5 | CH_egr_120 | 11 | 39 | 2.15685e-23 |
| Eucalyptus grandis | Chr07 | 5 | CH_egr_161 | 8 | 11 | 3.90754e-20 |
| Eutrema salsugineum | scaffold_2 | 5 | CH_esa_534 | 2 | 2 | 0.000761499 |
| Gossypium hirsutum | D13 | 5 | CH_ghi_1 | 26 | 35 | 8.66151e-72 |
| Gossypium hirsutum | A13 | 5 | CH_ghi_16 | 16 | 22 | 9.50834e-42 |
| Gossypium hirsutum | A04 | 5 | CH_ghi_766 | 3 | 3 | 0.0000329997 |
| Gossypium hirsutum | D04 | 5 | CH_ghi_767 | 3 | 3 | 0.0000329997 |
| Glycine max | Gm13 | 5 | CH_gma_395 | 3 | 4 | 0.00000103715 |
| Glycine max | Gm15 | 5 | CH_gma_396 | 3 | 4 | 0.00000103715 |
| Gossypium raimondii | Chr13 | 5 | CH_gra_1 | 23 | 35 | 1.16175e-63 |
| Gossypium raimondii | Chr12 | 5 | CH_gra_382 | 3 | 4 | 0.0000175038 |
| Helianthus annuus | HanXRQChr11 | 5 | CH_han_130 | 5 | 6 | 0.0000000000000126437 |
| Hydrangea macrophylla | Hma1.2p1_0119F.1 | 5 | CH_hma_240 | 3 | 11 | 0.0000305098 |
| Lupinus albus | Lalb_Chr05 | 5 | CH_lal_240 | 3 | 4 | 0.000000578379 |
| Lotus japonicus | chr6 | 5 | CH_lja_135 | 4 | 11 | 0.0000000253153 |
| Lonicera japonica | GWHAAZE00000005 | 5 | CH_lonja_294 | 4 | 5 | 0.000000000225518 |
| Magnolia biondii | Chr02 | 5 | CH_mbi_540 | 3 | 15 | 0.00000160936 |
| Malus domestica | Chr11 | 5 | CH_mdo_1017 | 2 | 2 | 0.000113763 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_17 | 15 | 23 | 1.46766e-38 |
| Manihot esculenta | Chromosome10 | 5 | CH_mes_26 | 12 | 14 | 2.85175e-32 |
| Medicago truncatula | chr4 | 5 | CH_mtr_353 | 4 | 5 | 0.000000000343293 |
| Medicago truncatula | chr3 | 5 | CH_mtr_533 | 4 | 14 | 0.0000000686434 |
| Nelumbo nucifera | chr5 | 5 | CH_nnu_428 | 3 | 17 | 0.000132321 |
| Nicotiana tabacum | Nitab4.5_0000902 | 5 | CH_nta_19 | 6 | 18 | 0.0000000000000464765 |
| Olea europaea | scaffold737 | 5 | CH_oeu_9 | 8 | 10 | 2.88903e-24 |
| Oryza sativa ssp. japonica | chr07 | 5 | CH_osa_159 | 4 | 4 | 0.000000000315984 |
| Oryza sativa ssp. japonica | chr07 | 5 | CH_osa_84 | 5 | 5 | 0.0000000000000751013 |
| Petunia axillaris | Peaxi162Scf00196 | 5 | CH_pax_305 | 3 | 6 | 0.0000051954 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_314 | 3 | 4 | 0.00000405305 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_97 | 5 | 8 | 0.00000000000335402 |
| Prunus persica | Pp06 | 5 | CH_ppe_132 | 5 | 5 | 0.0000000000000292683 |
| Prunus persica | Pp08 | 5 | CH_ppe_622 | 3 | 10 | 0.0000840191 |
| Pisum sativum | chr7LG7 | 5 | CH_psa_333 | 4 | 47 | 0.00000529195 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_14 | 16 | 25 | 2.37589e-41 |
| Populus trichocarpa | Chr07 | 5 | CH_ptr_68 | 8 | 11 | 4.80278e-19 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_269 | 3 | 3 | 0.000000283418 |
| Quercus lobata | 6 | 5 | CH_qlo_33 | 12 | 15 | 1.34701e-36 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_570 | 3 | 4 | 0.0000000953515 |
| Striga asiatica | scaffold45 | 5 | CH_sas_6 | 4 | 4 | 0.000000000000733797 |
| Salix brachista | GWHAAZH00000007 | 5 | CH_sbr_303 | 3 | 5 | 0.00000119102 |
| Sechium edule | LG07 | 5 | CH_sed_184 | 3 | 3 | 0.000000267217 |
| Solanum lycopersicum | SL4.0ch04 | 5 | CH_sly_209 | 4 | 6 | 0.00000000191031 |
| Schrenkiella parvula | ch6-6 | 5 | CH_spa_379 | 2 | 2 | 0.00078734 |
| Schrenkiella parvula | ch3-1 | 5 | CH_spa_380 | 2 | 2 | 0.00078734 |
| Solanum pennellii | Spenn-ch04 | 5 | CH_spe_18 | 8 | 8 | 2.63868e-24 |
| Solanum pennellii | Spenn-ch05 | 5 | CH_spe_529 | 3 | 6 | 0.000040329 |
| Solanum tuberosum | ST4.03ch04 | 5 | CH_stu_75 | 7 | 16 | 1.04839e-16 |
| Theobroma cacao | Chromosome_2 | 5 | CH_tca_20 | 10 | 11 | 1.42097e-29 |
| Tarenaya hassleriana | NW_010971389.1 | 5 | CH_tha_162 | 3 | 7 | 0.00000512039 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_265 | 3 | 3 | 0.00000103146 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_334 | 3 | 4 | 0.00000412485 |
| Tripterygium wilfordii | NC_052248.1 | 5 | CH_twi_214 | 3 | 3 | 0.000000769286 |
| Tripterygium wilfordii | NC_052249.1 | 5 | CH_twi_253 | 4 | 28 | 0.00000349726 |
| Zea mays | 1 | 5 | CH_zma_145 | 4 | 10 | 0.0000000277657 |
| Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_551 | 2 | 2 | 0.000198013 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 6 | CH_amhyb_413 | 2 | 2 | 0.000505051 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_367 | 3 | 28 | 0.000126208 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_381 | 2 | 2 | 0.0000286492 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 6 | CH_bvu_514 | 2 | 3 | 0.000745074 |
| Camellia sinensis var. sinensis | Chr1 | 6 | CH_camsi_5 | 16 | 19 | 1.05117e-49 |
| Cannabis sativa | NC_044377.1 | 6 | CH_cansat_220 | 3 | 7 | 0.000000226346 |
| Capsicum annuum | PGAv.1.6.scaffold525 | 6 | CH_can_67 | 7 | 12 | 7.13694e-19 |
| Cicer arietinum L. | Ca_LG6_v3 | 6 | CH_car_75 | 3 | 4 | 0.000000145376 |
| Citrus clementina | scaffold_7 | 6 | CH_ccl_224 | 4 | 5 | 0.00000000173859 |
| Citrus clementina | scaffold_8 | 6 | CH_ccl_98 | 6 | 9 | 0.00000000000000147406 |
| Carpinus fangiana | Cfa01 | 6 | CH_cfa_275 | 3 | 5 | 0.00000086023 |
| Carya illinoinensis | Chr01 | 6 | CH_cil_85 | 6 | 6 | 6.18343e-17 |
| Citrullus lanatus | CG_Chr09 | 6 | CH_cla_106 | 3 | 3 | 0.000000118051 |
| Cucumis melo | chr01 | 6 | CH_cme_166 | 3 | 3 | 0.000000133516 |
| Capsella rubella | scaffold_6 | 6 | CH_cru_658 | 2 | 2 | 0.000731154 |
| Cucumis sativus L. | chr4 | 6 | CH_csa_465 | 2 | 2 | 0.000500856 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_96 | 4 | 4 | 0.00000000000948749 |
| Eucalyptus grandis | Chr07 | 6 | CH_egr_120 | 11 | 39 | 2.15685e-23 |
| Eucalyptus grandis | Chr07 | 6 | CH_egr_161 | 8 | 11 | 3.90754e-20 |
| Eutrema salsugineum | scaffold_2 | 6 | CH_esa_534 | 2 | 2 | 0.000761499 |
| Gossypium hirsutum | D13 | 6 | CH_ghi_1 | 26 | 35 | 8.66151e-72 |
| Gossypium hirsutum | A13 | 6 | CH_ghi_16 | 16 | 22 | 9.50834e-42 |
| Gossypium hirsutum | A04 | 6 | CH_ghi_766 | 3 | 3 | 0.0000329997 |
| Gossypium hirsutum | D04 | 6 | CH_ghi_767 | 3 | 3 | 0.0000329997 |
| Glycine max | Gm13 | 6 | CH_gma_395 | 3 | 4 | 0.00000103715 |
| Glycine max | Gm15 | 6 | CH_gma_396 | 3 | 4 | 0.00000103715 |
| Gossypium raimondii | Chr13 | 6 | CH_gra_1 | 23 | 35 | 1.16175e-63 |
| Gossypium raimondii | Chr12 | 6 | CH_gra_382 | 3 | 4 | 0.0000175038 |
| Helianthus annuus | HanXRQChr11 | 6 | CH_han_130 | 5 | 6 | 0.0000000000000126437 |
| Hydrangea macrophylla | Hma1.2p1_0119F.1 | 6 | CH_hma_240 | 3 | 11 | 0.0000305098 |
| Lupinus albus | Lalb_Chr05 | 6 | CH_lal_240 | 3 | 4 | 0.000000578379 |
| Lotus japonicus | chr6 | 6 | CH_lja_135 | 4 | 11 | 0.0000000253153 |
| Lonicera japonica | GWHAAZE00000005 | 6 | CH_lonja_294 | 4 | 5 | 0.000000000225518 |
| Magnolia biondii | Chr02 | 6 | CH_mbi_540 | 3 | 15 | 0.00000160936 |
| Malus domestica | Chr11 | 6 | CH_mdo_1017 | 2 | 2 | 0.000113763 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_17 | 15 | 23 | 1.46766e-38 |
| Manihot esculenta | Chromosome10 | 6 | CH_mes_26 | 12 | 14 | 2.85175e-32 |
| Medicago truncatula | chr4 | 6 | CH_mtr_353 | 4 | 5 | 0.000000000343293 |
| Medicago truncatula | chr3 | 6 | CH_mtr_533 | 4 | 14 | 0.0000000686434 |
| Nelumbo nucifera | chr5 | 6 | CH_nnu_428 | 3 | 17 | 0.000132321 |
| Nicotiana tabacum | Nitab4.5_0000902 | 6 | CH_nta_19 | 6 | 18 | 0.0000000000000464765 |
| Olea europaea | scaffold737 | 6 | CH_oeu_9 | 8 | 10 | 2.88903e-24 |
| Oryza sativa ssp. japonica | chr07 | 6 | CH_osa_159 | 4 | 4 | 0.000000000315984 |
| Oryza sativa ssp. japonica | chr07 | 6 | CH_osa_84 | 5 | 5 | 0.0000000000000751013 |
| Petunia axillaris | Peaxi162Scf00196 | 6 | CH_pax_305 | 3 | 6 | 0.0000051954 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_314 | 3 | 4 | 0.00000405305 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_97 | 5 | 8 | 0.00000000000335402 |
| Prunus persica | Pp06 | 6 | CH_ppe_132 | 5 | 5 | 0.0000000000000292683 |
| Prunus persica | Pp08 | 6 | CH_ppe_622 | 3 | 10 | 0.0000840191 |
| Pisum sativum | chr7LG7 | 6 | CH_psa_333 | 4 | 47 | 0.00000529195 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_14 | 16 | 25 | 2.37589e-41 |
| Populus trichocarpa | Chr07 | 6 | CH_ptr_68 | 8 | 11 | 4.80278e-19 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_269 | 3 | 3 | 0.000000283418 |
| Quercus lobata | 6 | 6 | CH_qlo_33 | 12 | 15 | 1.34701e-36 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_570 | 3 | 4 | 0.0000000953515 |
| Striga asiatica | scaffold45 | 6 | CH_sas_6 | 4 | 4 | 0.000000000000733797 |
| Salix brachista | GWHAAZH00000007 | 6 | CH_sbr_303 | 3 | 5 | 0.00000119102 |
| Sechium edule | LG07 | 6 | CH_sed_184 | 3 | 3 | 0.000000267217 |
| Solanum lycopersicum | SL4.0ch04 | 6 | CH_sly_209 | 4 | 6 | 0.00000000191031 |
| Schrenkiella parvula | ch6-6 | 6 | CH_spa_379 | 2 | 2 | 0.00078734 |
| Schrenkiella parvula | ch3-1 | 6 | CH_spa_380 | 2 | 2 | 0.00078734 |
| Solanum pennellii | Spenn-ch04 | 6 | CH_spe_18 | 8 | 8 | 2.63868e-24 |
| Solanum pennellii | Spenn-ch05 | 6 | CH_spe_529 | 3 | 6 | 0.000040329 |
| Solanum tuberosum | ST4.03ch04 | 6 | CH_stu_75 | 7 | 16 | 1.04839e-16 |
| Theobroma cacao | Chromosome_2 | 6 | CH_tca_20 | 10 | 11 | 1.42097e-29 |
| Tarenaya hassleriana | NW_010971389.1 | 6 | CH_tha_162 | 3 | 7 | 0.00000512039 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_265 | 3 | 3 | 0.00000103146 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_334 | 3 | 4 | 0.00000412485 |
| Tripterygium wilfordii | NC_052248.1 | 6 | CH_twi_214 | 3 | 3 | 0.000000769286 |
| Tripterygium wilfordii | NC_052249.1 | 6 | CH_twi_253 | 4 | 28 | 0.00000349726 |
| Zea mays | 1 | 6 | CH_zma_145 | 4 | 10 | 0.0000000277657 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |