Functional clusters

Information

  • Type InterPro
  • Description GDSL esterase/lipase GLIP1-5/GLL25

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-10 5 CH_aar_91 4 5 0.00000000017086
Acer truncatum chr1 5 CH_acertr_52 5 5 0.00000000000000389094
Actinidia chinensis Lachesis_group1 5 CH_ach_312 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 5 CH_amhyb_44 4 5 0.0000000000447336
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 5 CH_arhy_339 4 6 0.000000000253547
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 5 CH_arhy_469 4 19 0.0000000654426
Amborella trichopoda AmTr_v1.0_scaffold00007 5 CH_atr_273 3 3 0.00000156199
Amborella trichopoda AmTr_v1.0_scaffold00016 5 CH_atr_50 6 11 0.0000000000000151845
Brassica oleracea C3 5 CH_bol_42 6 11 0.00000000000000194003
Beta vulgaris Chr7_EL10_PGA_scaffold5 5 CH_bvu_101 4 10 0.000000000357477
Camellia sinensis var. sinensis Chr15 5 CH_camsi_68 7 18 8.38419e-19
Cannabis sativa NC_044371.1 5 CH_cansat_4 13 14 1.37063e-43
Capsicum annuum PGAv.1.6.scaffold308 5 CH_can_661 2 2 0.000247831
Corylus avellana 11 5 CH_cav_8 12 15 7.45811e-37
Coffea canephora chr3 5 CH_ccan_393 3 47 0.0000594191
Citrus clementina scaffold_7 5 CH_ccl_149 4 4 0.00000000000828095
Carpinus fangiana Cfa01 5 CH_cfa_7 12 17 8.86107e-36
Carya illinoinensis Chr01 5 CH_cil_26 9 10 6.79898e-28
Carya illinoinensis Chr02 5 CH_cil_410 3 3 0.00000126786
Citrullus lanatus CG_Chr02 5 CH_cla_102 3 3 0.000000118051
Corchorus olitorius AWUE01020791.1 5 CH_col_30 5 6 0.0000000000183518
Corchorus olitorius AWUE01020790.1 5 CH_col_94 3 3 0.00000716807
Carica papaya supercontig_25 5 CH_cpa_108 3 4 0.0000000542253
Chenopodium quinoa C_Quinoa_Scaffold_2716 5 CH_cqu_130 5 7 0.00000000000102146
Chenopodium quinoa C_Quinoa_Scaffold_2493 5 CH_cqu_43 8 18 9.50396e-21
Capsella rubella scaffold_1 5 CH_cru_99 5 9 0.00000000000151192
Cucumis sativus L. chr3 5 CH_csa_204 3 3 0.000000365847
Daucus carota DCARv2_Chr5 5 CH_dca_397 2 2 0.0000637775
Davidia involucrata GWHABJS00000019 5 CH_din_634 2 2 0.000300075
Durio zibethinus NW_019167849.1 5 CH_dzi_210 3 3 0.000000270682
Durio zibethinus NW_019167982.1 5 CH_dzi_251 3 4 0.00000108259
Eucalyptus grandis Chr09 5 CH_egr_39 11 12 2.65071e-36
Fragaria vesca Fvb6 5 CH_fve_8 14 26 1.27088e-39
Gossypium hirsutum A05 5 CH_ghi_457 3 3 0.0000000898358
Gossypium hirsutum D05 5 CH_ghi_458 3 3 0.0000000898358
Gossypium raimondii Chr09 5 CH_gra_228 3 3 0.0000000431127
Hydrangea macrophylla Hma1.2p1_0090F.1 5 CH_hma_34 4 4 0.00000000000411317
Lupinus albus Lalb_Chr10 5 CH_lal_577 2 2 0.000314895
Lonicera japonica GWHAAZE00000005 5 CH_lonja_1025 2 2 0.000359324
Lonicera japonica GWHAAZE00000009 5 CH_lonja_1026 2 2 0.000359324
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_80 6 11 1.04421e-16
Malus domestica Chr09 5 CH_mdo_161 5 10 0.00000000000180481
Malus domestica Chr17 5 CH_mdo_655 3 5 0.00000355821
Manihot esculenta Chromosome11 5 CH_mes_22 10 10 5.52745e-33
Medicago truncatula chr8 5 CH_mtr_1411 2 2 0.000862813
Medicago truncatula chr8 5 CH_mtr_301 4 5 0.0000000000364123
Nelumbo nucifera chr8 5 CH_nnu_224 3 5 0.000000347996
Punica granatum NC_045132.1 5 CH_pgr_9 11 18 8.68677e-29
Prunus persica Pp03 5 CH_ppe_25 9 11 7.48243e-29
Pisum sativum chr4LG4 5 CH_psa_651 2 3 0.000469451
Populus trichocarpa Chr17 5 CH_ptr_130 7 43 0.000000000000605141
Populus trichocarpa Chr07 5 CH_ptr_467 3 4 0.00000911816
Quercus lobata 5 5 CH_qlo_114 10 18 1.61447e-23
Quercus lobata 4 5 CH_qlo_140 8 8 1.32273e-21
Quercus lobata 8 5 CH_qlo_154 8 9 1.18985e-20
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_35 14 59 1.76902e-31
Rhododendron simsii chr02 5 CH_rsi_275 4 6 0.000000000423181
Simmondsia chinensis GWHAASQ00000012 5 CH_sci_54 4 4 0.0000000000092595
Sechium edule LG06 5 CH_sed_174 3 3 0.000000267217
Solanum lycopersicum SL4.0ch06 5 CH_sly_115 5 5 0.000000000000114576
Solanum lycopersicum SL4.0ch11 5 CH_sly_498 3 5 0.0000147721
Selaginella moellendorffii scaffold_0 5 CH_smo_81 4 7 0.0000000610504
Solanum pennellii Spenn-ch06 5 CH_spe_148 4 6 0.000000000277156
Solanum tuberosum ST4.03ch11 5 CH_stu_481 3 7 0.0000077171
Selenicereus undatus Scaffold_19641 5 CH_sun_366 2 2 0.000726639
Trochodendron aralioides group11 5 CH_tar_936 2 2 0.000900549
Theobroma cacao Chromosome_6 5 CH_tca_98 5 5 0.0000000000000543898
Theobroma cacao Chromosome_2 5 CH_tca_99 5 5 0.0000000000000543898
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_188 3 3 0.0000000343818
Tripterygium wilfordii NC_052242.1 5 CH_twi_118 5 47 0.00000000232704
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_412 2 2 0.0000929238
Vigna mungo CM024078.1 5 CH_vmu_197 3 4 0.000000500961
Vitis vinifera chr9 5 CH_vvi_28 8 8 4.64377e-27
Aethionema arabicum LG-10 6 CH_aar_91 4 5 0.00000000017086
Acer truncatum chr1 6 CH_acertr_52 5 5 0.00000000000000389094
Actinidia chinensis Lachesis_group1 6 CH_ach_312 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 6 CH_amhyb_44 4 5 0.0000000000447336
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 6 CH_arhy_339 4 6 0.000000000253547
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 6 CH_arhy_469 4 19 0.0000000654426
Amborella trichopoda AmTr_v1.0_scaffold00007 6 CH_atr_273 3 3 0.00000156199
Amborella trichopoda AmTr_v1.0_scaffold00016 6 CH_atr_50 6 11 0.0000000000000151845
Brassica oleracea C3 6 CH_bol_42 6 11 0.00000000000000194003
Beta vulgaris Chr7_EL10_PGA_scaffold5 6 CH_bvu_101 4 10 0.000000000357477
Camellia sinensis var. sinensis Chr15 6 CH_camsi_68 7 18 8.38419e-19
Cannabis sativa NC_044371.1 6 CH_cansat_4 13 14 1.37063e-43
Capsicum annuum PGAv.1.6.scaffold308 6 CH_can_661 2 2 0.000247831
Corylus avellana 11 6 CH_cav_8 12 15 7.45811e-37
Coffea canephora chr3 6 CH_ccan_393 3 47 0.0000594191
Citrus clementina scaffold_7 6 CH_ccl_149 4 4 0.00000000000828095
Carpinus fangiana Cfa01 6 CH_cfa_7 12 17 8.86107e-36
Carya illinoinensis Chr01 6 CH_cil_26 9 10 6.79898e-28
Carya illinoinensis Chr02 6 CH_cil_410 3 3 0.00000126786
Citrullus lanatus CG_Chr02 6 CH_cla_102 3 3 0.000000118051
Cucumis melo chr01 6 CH_cme_189 3 3 0.000000560766
Cucumis melo chr04 6 CH_cme_237 3 5 0.0000056056
Corchorus olitorius AWUE01020791.1 6 CH_col_30 5 6 0.0000000000183518
Corchorus olitorius AWUE01020790.1 6 CH_col_94 3 3 0.00000716807
Carica papaya supercontig_25 6 CH_cpa_108 3 4 0.0000000542253
Chenopodium quinoa C_Quinoa_Scaffold_2716 6 CH_cqu_130 5 7 0.00000000000102146
Chenopodium quinoa C_Quinoa_Scaffold_2493 6 CH_cqu_43 8 18 9.50396e-21
Capsella rubella scaffold_1 6 CH_cru_99 5 9 0.00000000000151192
Cucumis sativus L. chr3 6 CH_csa_204 3 3 0.000000365847
Daucus carota DCARv2_Chr5 6 CH_dca_397 2 2 0.0000637775
Davidia involucrata GWHABJS00000019 6 CH_din_634 2 2 0.000300075
Durio zibethinus NW_019167849.1 6 CH_dzi_210 3 3 0.000000270682
Durio zibethinus NW_019167982.1 6 CH_dzi_251 3 4 0.00000108259
Eucalyptus grandis Chr09 6 CH_egr_39 11 12 2.65071e-36
Fragaria x ananassa Fvb6-1 6 CH_fan_21 8 15 1.18616e-20
Fragaria x ananassa Fvb6-2 6 CH_fan_34 7 11 2.74092e-18
Fragaria x ananassa Fvb6-4 6 CH_fan_757 3 6 0.0000461427
Fragaria x ananassa Fvb6-3 6 CH_fan_80 6 11 0.0000000000000165859
Fragaria vesca Fvb6 6 CH_fve_8 14 26 1.27088e-39
Gossypium hirsutum A05 6 CH_ghi_457 3 3 0.0000000898358
Gossypium hirsutum D05 6 CH_ghi_458 3 3 0.0000000898358
Gossypium raimondii Chr09 6 CH_gra_228 3 3 0.0000000431127
Hydrangea macrophylla Hma1.2p1_0090F.1 6 CH_hma_34 4 4 0.00000000000411317
Lupinus albus Lalb_Chr10 6 CH_lal_577 2 2 0.000314895
Lonicera japonica GWHAAZE00000005 6 CH_lonja_1025 2 2 0.000359324
Lonicera japonica GWHAAZE00000009 6 CH_lonja_1026 2 2 0.000359324
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_80 6 11 1.04421e-16
Malus domestica Chr09 6 CH_mdo_161 5 10 0.00000000000180481
Malus domestica Chr17 6 CH_mdo_655 3 5 0.00000355821
Manihot esculenta Chromosome11 6 CH_mes_22 10 10 5.52745e-33
Medicago truncatula chr8 6 CH_mtr_1411 2 2 0.000862813
Medicago truncatula chr8 6 CH_mtr_301 4 5 0.0000000000364123
Nelumbo nucifera chr8 6 CH_nnu_224 3 5 0.000000347996
Punica granatum NC_045132.1 6 CH_pgr_9 11 18 8.68677e-29
Prunus persica Pp03 6 CH_ppe_25 9 11 7.48243e-29
Pisum sativum chr4LG4 6 CH_psa_651 2 3 0.000469451
Populus trichocarpa Chr17 6 CH_ptr_130 7 43 0.000000000000605141
Populus trichocarpa Chr07 6 CH_ptr_467 3 4 0.00000911816
Quercus lobata 5 6 CH_qlo_114 10 18 1.61447e-23
Quercus lobata 4 6 CH_qlo_140 8 8 1.32273e-21
Quercus lobata 8 6 CH_qlo_154 8 9 1.18985e-20
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_35 14 59 1.76902e-31
Rhododendron simsii chr02 6 CH_rsi_275 4 6 0.000000000423181
Simmondsia chinensis GWHAASQ00000012 6 CH_sci_54 4 4 0.0000000000092595
Sechium edule LG06 6 CH_sed_174 3 3 0.000000267217
Solanum lycopersicum SL4.0ch06 6 CH_sly_115 5 5 0.000000000000114576
Solanum lycopersicum SL4.0ch11 6 CH_sly_498 3 5 0.0000147721
Selaginella moellendorffii scaffold_0 6 CH_smo_81 4 7 0.0000000610504
Solanum pennellii Spenn-ch06 6 CH_spe_148 4 6 0.000000000277156
Solanum tuberosum ST4.03ch11 6 CH_stu_481 3 7 0.0000077171
Selenicereus undatus Scaffold_19641 6 CH_sun_366 2 2 0.000726639
Trochodendron aralioides group11 6 CH_tar_936 2 2 0.000900549
Theobroma cacao Chromosome_6 6 CH_tca_98 5 5 0.0000000000000543898
Theobroma cacao Chromosome_2 6 CH_tca_99 5 5 0.0000000000000543898
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_188 3 3 0.0000000343818
Tripterygium wilfordii NC_052242.1 6 CH_twi_118 5 47 0.00000000232704
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_412 2 2 0.0000929238
Vigna mungo CM024078.1 6 CH_vmu_197 3 4 0.000000500961
Vitis vinifera chr9 6 CH_vvi_28 8 8 4.64377e-27

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001