Functional clusters

Information

  • Type InterPro
  • Description Periodic tryptophan protein 1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 5 CH_acertr_919 2 2 0.000422982
Arabidopsis lyrata scaffold_7 5 CH_aly_623 2 2 0.000396027
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 5 CH_arhy_93 8 23 1.64693e-21
Arabidopsis thaliana Chr4 5 CH_ath_502 2 3 0.000257837
Brassica carinata Contig324 5 CH_bca_2164 2 2 0.000961939
Brassica carinata ChrB04 5 CH_bca_2165 2 2 0.000961939
Brassica carinata ChrC01 5 CH_bca_527 3 3 0.0000000822522
Brassica napus C03 5 CH_bna_1320 2 2 0.000389795
Brassica oleracea C3 5 CH_bol_740 2 2 0.000326861
Brassica rapa A08 5 CH_bra_537 2 2 0.000429314
Corylus avellana 3 5 CH_cav_547 2 2 0.0000766695
Coffea canephora chr4 5 CH_ccan_269 2 3 0.00000425891
Capsella rubella scaffold_7 5 CH_cru_548 2 2 0.000219346
Pisum sativum chr2LG1 5 CH_psa_473 2 2 0.0000521635
Populus trichocarpa Chr07 5 CH_ptr_603 2 3 0.000173395
Solanum tuberosum ST4.03ch04 5 CH_stu_730 2 2 0.000153736
Acer truncatum chr1 6 CH_acertr_919 2 2 0.000422982
Arabidopsis lyrata scaffold_7 6 CH_aly_623 2 2 0.000396027
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 6 CH_arhy_93 8 23 1.64693e-21
Arabidopsis thaliana Chr4 6 CH_ath_502 2 3 0.000257837
Brassica carinata Contig324 6 CH_bca_2164 2 2 0.000961939
Brassica carinata ChrB04 6 CH_bca_2165 2 2 0.000961939
Brassica carinata ChrC01 6 CH_bca_527 3 3 0.0000000822522
Brassica napus C03 6 CH_bna_1320 2 2 0.000389795
Brassica oleracea C3 6 CH_bol_740 2 2 0.000326861
Brassica rapa A08 6 CH_bra_537 2 2 0.000429314
Corylus avellana 3 6 CH_cav_547 2 2 0.0000766695
Coffea canephora chr4 6 CH_ccan_269 2 3 0.00000425891
Capsella rubella scaffold_7 6 CH_cru_548 2 2 0.000219346
Pisum sativum chr2LG1 6 CH_psa_473 2 2 0.0000521635
Populus trichocarpa Chr07 6 CH_ptr_603 2 3 0.000173395
Solanum tuberosum ST4.03ch04 6 CH_stu_730 2 2 0.000153736

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001