Functional clusters

Information

  • Type InterPro
  • Description Transcription factor BHLH95-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group2 5 CH_ach_397 2 2 0.000162964
Camellia sinensis var. sinensis Chr3 5 CH_camsi_793 3 13 0.00000901543
Capsicum annuum PGAv.1.6.scaffold1041 5 CH_can_175 4 7 0.000000000295952
Cardamine hirsuta Chr1 5 CH_chi_197 3 3 0.0000000071667
Gossypium hirsutum A01 5 CH_ghi_1220 2 2 0.000560733
Glycine max Gm02 5 CH_gma_561 2 2 0.0000379557
Lupinus albus Lalb_Chr20 5 CH_lal_641 2 2 0.000314895
Medicago truncatula chr4 5 CH_mtr_1100 2 2 0.000123259
Nelumbo nucifera chr7 5 CH_nnu_570 2 2 0.000481684
Oryza sativa ssp. japonica chr04 5 CH_osa_663 2 2 0.000316874
Punica granatum NC_045128.1 5 CH_pgr_519 2 2 0.000225107
Pisum sativum chr7LG7 5 CH_psa_749 2 2 0.000782452
Phaseolus vulgaris Chr03 5 CH_pvu_472 2 2 0.0000734727
Salvia bowleyana GWHASIU00000002 5 CH_sbo_591 2 2 0.000136494
Sequoiadendron giganteum chr1 5 CH_sgi_525 5 8 0.00000000000304301
Solanum lycopersicum SL4.0ch01 5 CH_sly_389 3 3 0.00000113688
Solanum lycopersicum SL4.0ch01 5 CH_sly_390 3 3 0.00000113688
Solanum pennellii Spenn-ch01 5 CH_spe_158 4 5 0.000000000435549
Solanum pennellii Spenn-ch01 5 CH_spe_891 3 23 0.000864493
Solanum tuberosum ST4.03ch01 5 CH_stu_170 4 4 0.00000000000605629
Tripterygium wilfordii NC_052238.1 5 CH_twi_463 2 2 0.000334504
Vigna mungo CM024069.1 5 CH_vmu_368 2 2 0.0000646141
Actinidia chinensis Lachesis_group2 6 CH_ach_397 2 2 0.000162964
Camellia sinensis var. sinensis Chr3 6 CH_camsi_793 3 13 0.00000901543
Capsicum annuum PGAv.1.6.scaffold1041 6 CH_can_175 4 7 0.000000000295952
Cardamine hirsuta Chr1 6 CH_chi_197 3 3 0.0000000071667
Gossypium hirsutum A01 6 CH_ghi_1220 2 2 0.000560733
Glycine max Gm02 6 CH_gma_561 2 2 0.0000379557
Lupinus albus Lalb_Chr20 6 CH_lal_641 2 2 0.000314895
Medicago truncatula chr4 6 CH_mtr_1100 2 2 0.000123259
Nelumbo nucifera chr7 6 CH_nnu_570 2 2 0.000481684
Oryza sativa ssp. japonica chr04 6 CH_osa_663 2 2 0.000316874
Punica granatum NC_045128.1 6 CH_pgr_519 2 2 0.000225107
Pisum sativum chr7LG7 6 CH_psa_749 2 2 0.000782452
Phaseolus vulgaris Chr03 6 CH_pvu_472 2 2 0.0000734727
Salvia bowleyana GWHASIU00000002 6 CH_sbo_591 2 2 0.000136494
Sequoiadendron giganteum chr1 6 CH_sgi_525 5 8 0.00000000000304301
Solanum lycopersicum SL4.0ch01 6 CH_sly_389 3 3 0.00000113688
Solanum lycopersicum SL4.0ch01 6 CH_sly_390 3 3 0.00000113688
Solanum pennellii Spenn-ch01 6 CH_spe_158 4 5 0.000000000435549
Solanum pennellii Spenn-ch01 6 CH_spe_891 3 23 0.000864493
Solanum tuberosum ST4.03ch01 6 CH_stu_170 4 4 0.00000000000605629
Tripterygium wilfordii NC_052238.1 6 CH_twi_463 2 2 0.000334504
Vigna mungo CM024069.1 6 CH_vmu_368 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001