Functional clusters

Information

  • Type InterPro
  • Description Protein TONSOKU

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102835_HRSCAF_103059 5 CH_ama_130 2 2 0.0000862218
Chara braunii BFEA01000426 5 CH_cbr_335 2 3 0.000647303
Carya illinoinensis Chr03 5 CH_cil_175 4 6 0.0000000000107162
Carica papaya supercontig_42 5 CH_cpa_399 2 2 0.0000950661
Hydrangea macrophylla Hma1.2p1_0006F.1 5 CH_hma_516 2 4 0.000333241
Malus domestica Chr17 5 CH_mdo_1131 2 2 0.000227527
Sequoiadendron giganteum chr9 5 CH_sgi_1104 3 4 0.000000142385
Sapria himalayana scaffold12_13443846 5 CH_shi_345 2 2 0.0000571804
Trochodendron aralioides group11 5 CH_tar_805 2 2 0.00036022
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_159 3 3 0.0000000129529
Avicennia marina ScioBoG_102835_HRSCAF_103059 6 CH_ama_130 2 2 0.0000862218
Chara braunii BFEA01000426 6 CH_cbr_335 2 3 0.000647303
Carya illinoinensis Chr03 6 CH_cil_175 4 6 0.0000000000107162
Carica papaya supercontig_42 6 CH_cpa_399 2 2 0.0000950661
Hydrangea macrophylla Hma1.2p1_0006F.1 6 CH_hma_516 2 4 0.000333241
Malus domestica Chr17 6 CH_mdo_1131 2 2 0.000227527
Sequoiadendron giganteum chr9 6 CH_sgi_1104 3 4 0.000000142385
Sapria himalayana scaffold12_13443846 6 CH_shi_345 2 2 0.0000571804
Trochodendron aralioides group11 6 CH_tar_805 2 2 0.00036022
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_159 3 3 0.0000000129529

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001