Functional clusters

Information

  • Type InterPro
  • Description DNA/RNA polymerase superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 5 CH_acertr_491 11 65 0.0000302127
Arabidopsis lyrata scaffold_8 5 CH_aly_134 5 6 0.000000000277083
Aquilegia oxysepala CHR02 5 CH_aox_179 5 5 0.000000449216
Arabidopsis thaliana ChrM 5 CH_ath_407 3 7 0.0000663027
Beta vulgaris Chr1_EL10_PGA_scaffold3 5 CH_bvu_451 3 3 0.00038887
Cicer arietinum L. Ca_LG7_v3 5 CH_car_239 7 22 0.0000946585
Cicer arietinum L. Ca_LG1_v3 5 CH_car_250 8 35 0.000130033
Cicer arietinum L. Ca_LG5_v3 5 CH_car_377 5 9 0.000611107
Cicer arietinum L. Ca_LG5_v3 5 CH_car_396 10 80 0.000731986
Chara braunii BFEA01000174 5 CH_cbr_113 30 49 0.00000181701
Chara braunii BFEA01000277 5 CH_cbr_128 20 26 0.00000572166
Chara braunii BFEA01000009 5 CH_cbr_154 29 51 0.000044583
Chara braunii BFEA01000066 5 CH_cbr_212 25 41 0.0000805944
Chara braunii BFEA01000202 5 CH_cbr_216 27 47 0.000119857
Chara braunii BFEA01000212 5 CH_cbr_219 20 29 0.000138361
Chara braunii BFEA01000076 5 CH_cbr_289 26 46 0.000370398
Chara braunii BFEA01000545 5 CH_cbr_290 17 23 0.000385923
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_502 30 68 0.0000353518
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_600 30 71 0.000124829
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_714 29 70 0.000393135
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_792 30 75 0.000583729
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_835 27 64 0.000795828
Punica granatum NC_045133.1 5 CH_pgr_191 7 15 0.000000029496
Solanum pennellii Spenn-ch12 5 CH_spe_329 18 22 0.000000517644
Solanum pennellii Spenn-ch06 5 CH_spe_422 30 57 0.00000470223
Solanum pennellii Spenn-ch03 5 CH_spe_577 29 58 0.0000471074
Solanum pennellii Spenn-ch11 5 CH_spe_586 28 55 0.0000535672
Solanum pennellii Spenn-ch01 5 CH_spe_817 22 40 0.000494693
Solanum pennellii Spenn-ch07 5 CH_spe_833 30 67 0.000662032
Solanum pennellii Spenn-ch05 5 CH_spe_834 25 50 0.00066208
Solanum pennellii Spenn-ch01 5 CH_spe_889 29 64 0.000824128
Solanum pennellii Spenn-ch09 5 CH_spe_918 26 54 0.000936998
Tarenaya hassleriana NW_010968506.1 5 CH_tha_360 3 3 0.000889048
Acer truncatum chr8 6 CH_acertr_491 11 65 0.0000302127
Arabidopsis lyrata scaffold_8 6 CH_aly_134 5 6 0.000000000277083
Aquilegia oxysepala CHR02 6 CH_aox_179 5 5 0.000000449216
Arabidopsis thaliana ChrM 6 CH_ath_407 3 7 0.0000663027
Beta vulgaris Chr1_EL10_PGA_scaffold3 6 CH_bvu_451 3 3 0.00038887
Cicer arietinum L. Ca_LG7_v3 6 CH_car_239 7 22 0.0000946585
Cicer arietinum L. Ca_LG1_v3 6 CH_car_250 8 35 0.000130033
Cicer arietinum L. Ca_LG5_v3 6 CH_car_377 5 9 0.000611107
Cicer arietinum L. Ca_LG5_v3 6 CH_car_396 10 80 0.000731986
Chara braunii BFEA01000174 6 CH_cbr_113 30 49 0.00000181701
Chara braunii BFEA01000277 6 CH_cbr_128 20 26 0.00000572166
Chara braunii BFEA01000009 6 CH_cbr_154 29 51 0.000044583
Chara braunii BFEA01000066 6 CH_cbr_212 25 41 0.0000805944
Chara braunii BFEA01000202 6 CH_cbr_216 27 47 0.000119857
Chara braunii BFEA01000212 6 CH_cbr_219 20 29 0.000138361
Chara braunii BFEA01000076 6 CH_cbr_289 26 46 0.000370398
Chara braunii BFEA01000545 6 CH_cbr_290 17 23 0.000385923
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_502 30 68 0.0000353518
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_600 30 71 0.000124829
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_714 29 70 0.000393135
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_792 30 75 0.000583729
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_835 27 64 0.000795828
Punica granatum NC_045133.1 6 CH_pgr_191 7 15 0.000000029496
Solanum pennellii Spenn-ch12 6 CH_spe_329 18 22 0.000000517644
Solanum pennellii Spenn-ch06 6 CH_spe_422 30 57 0.00000470223
Solanum pennellii Spenn-ch03 6 CH_spe_577 29 58 0.0000471074
Solanum pennellii Spenn-ch11 6 CH_spe_586 28 55 0.0000535672
Solanum pennellii Spenn-ch01 6 CH_spe_817 22 40 0.000494693
Solanum pennellii Spenn-ch07 6 CH_spe_833 30 67 0.000662032
Solanum pennellii Spenn-ch05 6 CH_spe_834 25 50 0.00066208
Solanum pennellii Spenn-ch01 6 CH_spe_889 29 64 0.000824128
Solanum pennellii Spenn-ch09 6 CH_spe_918 26 54 0.000936998
Tarenaya hassleriana NW_010968506.1 6 CH_tha_360 3 3 0.000889048

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001