Functional clusters

Information

  • Type InterPro
  • Description Reverse transcriptase, RNase H-like domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 5 CH_amhyb_401 2 2 0.000505051
Camellia sinensis var. sinensis Chr11 5 CH_camsi_1109 3 3 0.000137769
Capsella rubella scaffold_5 5 CH_cru_472 2 2 0.0000731154
Durio zibethinus NW_019167838.1 5 CH_dzi_582 2 2 0.000695233
Punica granatum NC_045127.1 5 CH_pgr_284 7 77 0.00000140257
Solanum pennellii Spenn-ch01 5 CH_spe_274 19 65 0.0000000844219
Solanum pennellii Spenn-ch11 5 CH_spe_435 12 28 0.00000613858
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 6 CH_amhyb_401 2 2 0.000505051
Camellia sinensis var. sinensis Chr11 6 CH_camsi_1109 3 3 0.000137769
Capsella rubella scaffold_5 6 CH_cru_472 2 2 0.0000731154
Durio zibethinus NW_019167838.1 6 CH_dzi_582 2 2 0.000695233
Punica granatum NC_045127.1 6 CH_pgr_284 7 77 0.00000140257
Solanum pennellii Spenn-ch01 6 CH_spe_274 19 65 0.0000000844219
Solanum pennellii Spenn-ch11 6 CH_spe_435 12 28 0.00000613858

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001