Functional clusters

Information

  • Type InterPro
  • Description RPN1, N-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00057 5 CH_atr_518 2 2 0.000238322
Corylus avellana 5 5 CH_cav_237 3 4 0.000000141073
Gossypium hirsutum A08 5 CH_ghi_1356 2 2 0.000961256
Lonicera japonica GWHAAZE00000001 5 CH_lonja_1092 2 2 0.000359324
Quercus lobata 8 5 CH_qlo_861 3 4 0.000000319847
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1255 2 2 0.000239192
Salvia bowleyana GWHASIU00000005 5 CH_sbo_370 3 11 0.00000204876
Vanilla planifolia CM028152.1 5 CH_vpl_691 2 5 0.000738798
Amborella trichopoda AmTr_v1.0_scaffold00057 6 CH_atr_518 2 2 0.000238322
Corylus avellana 5 6 CH_cav_237 3 4 0.000000141073
Fragaria x ananassa Fvb3-3 6 CH_fan_1123 3 24 0.000580898
Gossypium hirsutum A08 6 CH_ghi_1356 2 2 0.000961256
Lonicera japonica GWHAAZE00000001 6 CH_lonja_1092 2 2 0.000359324
Quercus lobata 8 6 CH_qlo_861 3 4 0.000000319847
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1255 2 2 0.000239192
Salvia bowleyana GWHASIU00000005 6 CH_sbo_370 3 11 0.00000204876
Vanilla planifolia CM028152.1 6 CH_vpl_691 2 5 0.000738798

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001