Functional clusters

Information

  • Type InterPro
  • Description Small RNA 2'-O-methyltransferase Hen1, La-motif C-terminal domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 5 CH_aly_453 2 2 0.0000660044
Arabidopsis thaliana Chr4 5 CH_ath_598 2 7 0.00060159
Brassica carinata ChrC09 5 CH_bca_1328 2 2 0.0000641293
Brassica napus C01 5 CH_bna_992 2 2 0.000055685
Brassica oleracea C1 5 CH_bol_143 3 3 0.0000000016026
Brassica rapa A01 5 CH_bra_104 3 3 0.00000000276471
Corylus avellana 9 5 CH_cav_153 4 12 0.00000000066913
Cardamine hirsuta Chr7 5 CH_chi_520 2 2 0.0000691204
Capsella rubella scaffold_7 5 CH_cru_471 2 2 0.0000731154
Eutrema salsugineum scaffold_1 5 CH_esa_350 2 2 0.0000761499
Helianthus annuus HanXRQChr04 5 CH_han_820 2 2 0.0000386429
Schrenkiella parvula ch7-4 5 CH_spa_245 2 2 0.000078734
Arabidopsis lyrata scaffold_7 6 CH_aly_453 2 2 0.0000660044
Arabidopsis thaliana Chr4 6 CH_ath_598 2 7 0.00060159
Brassica carinata ChrC09 6 CH_bca_1328 2 2 0.0000641293
Brassica napus C01 6 CH_bna_992 2 2 0.000055685
Brassica oleracea C1 6 CH_bol_143 3 3 0.0000000016026
Brassica rapa A01 6 CH_bra_104 3 3 0.00000000276471
Corylus avellana 9 6 CH_cav_153 4 12 0.00000000066913
Cardamine hirsuta Chr7 6 CH_chi_520 2 2 0.0000691204
Capsella rubella scaffold_7 6 CH_cru_471 2 2 0.0000731154
Eutrema salsugineum scaffold_1 6 CH_esa_350 2 2 0.0000761499
Helianthus annuus HanXRQChr04 6 CH_han_820 2 2 0.0000386429
Schrenkiella parvula ch7-4 6 CH_spa_245 2 2 0.000078734

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001