Functional clusters

Information

  • Type InterPro
  • Description CCR4-NOT transcription complex subunit 1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group23 5 CH_ach_25 5 5 0.00000000000101264
Actinidia chinensis Lachesis_group23 5 CH_ach_5 9 11 9.9294e-25
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 5 CH_arhy_1111 2 2 0.000299383
Brassica oleracea C5 5 CH_bol_792 2 2 0.000490292
Camellia sinensis var. sinensis Chr1 5 CH_camsi_141 7 39 0.0000000000000283484
Camellia sinensis var. sinensis Chr6 5 CH_camsi_634 3 3 0.00000090206
Capsicum annuum PGAv.1.6.scaffold78 5 CH_can_722 2 2 0.000247831
Corylus avellana 1 5 CH_cav_95 4 4 0.00000000000135219
Ceratophyllum demersum 9 5 CH_cde_21 4 4 0.00000000000739073
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_644 2 2 0.000134617
Gossypium hirsutum D11 5 CH_ghi_455 3 4 0.0000000855542
Helianthus annuus HanXRQChr16 5 CH_han_387 3 3 0.0000000223995
Hydrangea macrophylla Hma1.2p1_0341F.1 5 CH_hma_464 2 2 0.000111086
Malus domestica Chr07 5 CH_mdo_152 4 4 0.000000000000818014
Olea europaea chr3 5 CH_oeu_563 2 2 0.000320273
Oryza sativa ssp. japonica chr03 5 CH_osa_218 3 3 0.0000000167352
Sapria himalayana scaffold16_12220143 5 CH_shi_6 6 6 1.37576e-20
Theobroma cacao Chromosome_3 5 CH_tca_633 2 2 0.000219716
Actinidia chinensis Lachesis_group23 6 CH_ach_25 5 5 0.00000000000101264
Actinidia chinensis Lachesis_group23 6 CH_ach_5 9 11 9.9294e-25
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 6 CH_arhy_1111 2 2 0.000299383
Brassica oleracea C5 6 CH_bol_792 2 2 0.000490292
Camellia sinensis var. sinensis Chr1 6 CH_camsi_141 7 39 0.0000000000000283484
Camellia sinensis var. sinensis Chr6 6 CH_camsi_634 3 3 0.00000090206
Capsicum annuum PGAv.1.6.scaffold78 6 CH_can_722 2 2 0.000247831
Corylus avellana 1 6 CH_cav_95 4 4 0.00000000000135219
Ceratophyllum demersum 9 6 CH_cde_21 4 4 0.00000000000739073
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_644 2 2 0.000134617
Gossypium hirsutum D11 6 CH_ghi_455 3 4 0.0000000855542
Helianthus annuus HanXRQChr16 6 CH_han_387 3 3 0.0000000223995
Hydrangea macrophylla Hma1.2p1_0341F.1 6 CH_hma_464 2 2 0.000111086
Malus domestica Chr07 6 CH_mdo_152 4 4 0.000000000000818014
Olea europaea chr3 6 CH_oeu_563 2 2 0.000320273
Oryza sativa ssp. japonica chr03 6 CH_osa_218 3 3 0.0000000167352
Sapria himalayana scaffold16_12220143 6 CH_shi_6 6 6 1.37576e-20
Theobroma cacao Chromosome_3 6 CH_tca_633 2 2 0.000219716

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001