Functional clusters

Information

  • Type InterPro
  • Description Protein transport protein SEC31-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 5 CH_aag_215 2 2 0.0000802568
Amborella trichopoda AmTr_v1.0_scaffold00111 5 CH_atr_160 3 3 0.00000000946662
Brassica napus A09 5 CH_bna_1374 2 2 0.000519726
Brassica rapa A09 5 CH_bra_476 2 2 0.000257588
Corylus avellana 1 5 CH_cav_656 2 2 0.000230008
Carica papaya supercontig_125 5 CH_cpa_393 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_3674 5 CH_cqu_764 2 2 0.000142146
Fragaria vesca Fvb7 5 CH_fve_618 2 3 0.000176725
Lonicera japonica GWHAAZE00000009 5 CH_lonja_949 2 2 0.000179662
Trochodendron aralioides group2 5 CH_tar_803 2 2 0.00036022
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_44 6 9 0.0000000000000140993
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_723 2 2 0.000557543
Vanilla planifolia CM028150.1 5 CH_vpl_440 2 2 0.000073888
Anthoceros agrestis Sc2ySwM_117 6 CH_aag_215 2 2 0.0000802568
Amborella trichopoda AmTr_v1.0_scaffold00111 6 CH_atr_160 3 3 0.00000000946662
Brassica napus A09 6 CH_bna_1374 2 2 0.000519726
Brassica rapa A09 6 CH_bra_476 2 2 0.000257588
Corylus avellana 1 6 CH_cav_656 2 2 0.000230008
Carica papaya supercontig_125 6 CH_cpa_393 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_3674 6 CH_cqu_764 2 2 0.000142146
Fragaria x ananassa Fvb7-2 6 CH_fan_1233 2 3 0.000832634
Fragaria x ananassa Fvb7-1 6 CH_fan_1234 2 3 0.000832634
Fragaria vesca Fvb7 6 CH_fve_618 2 3 0.000176725
Lonicera japonica GWHAAZE00000009 6 CH_lonja_949 2 2 0.000179662
Trochodendron aralioides group2 6 CH_tar_803 2 2 0.00036022
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_44 6 9 0.0000000000000140993
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_723 2 2 0.000557543
Vanilla planifolia CM028150.1 6 CH_vpl_440 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001