Functional clusters

Information

  • Type InterPro
  • Description Transcription initiation factor TFIID subunit 1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-7 5 CH_aar_162 3 3 0.000000249713
Acer truncatum chr3 5 CH_acertr_110 4 4 0.0000000000157678
Ceratophyllum demersum 6 5 CH_cde_252 2 2 0.0000789796
Cardamine hirsuta Chr3 5 CH_chi_230 3 3 0.0000000286668
Oryza sativa ssp. japonica chr06 5 CH_osa_198 3 3 0.00000000418381
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1150 2 2 0.000119596
Sequoiadendron giganteum chr5 5 CH_sgi_279 5 5 4.22455e-17
Trochodendron aralioides group12 5 CH_tar_852 2 3 0.000540303
Vigna mungo CM024074.1 5 CH_vmu_366 2 2 0.0000646141
Vanilla planifolia CM028157.1 5 CH_vpl_439 2 2 0.000073888
Aethionema arabicum LG-7 6 CH_aar_162 3 3 0.000000249713
Acer truncatum chr3 6 CH_acertr_110 4 4 0.0000000000157678
Ceratophyllum demersum 6 6 CH_cde_252 2 2 0.0000789796
Cardamine hirsuta Chr3 6 CH_chi_230 3 3 0.0000000286668
Oryza sativa ssp. japonica chr06 6 CH_osa_198 3 3 0.00000000418381
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1150 2 2 0.000119596
Sequoiadendron giganteum chr5 6 CH_sgi_279 5 5 4.22455e-17
Trochodendron aralioides group12 6 CH_tar_852 2 3 0.000540303
Vigna mungo CM024074.1 6 CH_vmu_366 2 2 0.0000646141
Vanilla planifolia CM028157.1 6 CH_vpl_439 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001