Functional clusters

Information

  • Type InterPro
  • Description Syndetin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 6 5 CH_cav_94 4 4 0.00000000000135219
Carica papaya supercontig_47 5 CH_cpa_140 3 5 0.000000135557
Gossypium hirsutum A07 5 CH_ghi_1057 2 2 0.000267016
Lonicera japonica GWHAAZE00000002 5 CH_lonja_278 4 10 0.000000000135303
Petunia axillaris Peaxi162Scf00150 5 CH_pax_465 2 2 0.0000703556
Sequoiadendron giganteum chr7 5 CH_sgi_1850 2 2 0.0000487151
Sapria himalayana scaffold2_22354274 5 CH_shi_7 6 7 9.63007e-20
Utricularia gibba unitig_746 5 CH_ugi_37 3 3 0.0000000100982
Vanilla planifolia CM028161.1 5 CH_vpl_143 3 6 0.000000163771
Corylus avellana 6 6 CH_cav_94 4 4 0.00000000000135219
Carica papaya supercontig_47 6 CH_cpa_140 3 5 0.000000135557
Gossypium hirsutum A07 6 CH_ghi_1057 2 2 0.000267016
Lonicera japonica GWHAAZE00000002 6 CH_lonja_278 4 10 0.000000000135303
Petunia axillaris Peaxi162Scf00150 6 CH_pax_465 2 2 0.0000703556
Sequoiadendron giganteum chr7 6 CH_sgi_1850 2 2 0.0000487151
Sapria himalayana scaffold2_22354274 6 CH_shi_7 6 7 9.63007e-20
Utricularia gibba unitig_746 6 CH_ugi_37 3 3 0.0000000100982
Vanilla planifolia CM028161.1 6 CH_vpl_143 3 6 0.000000163771

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001