Functional clusters
Information
- Type InterPro
- Description UDP-sugar pyrophosphorylase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 5 | CH_amhyb_362 | 2 | 2 | 0.000505051 |
| Hydrangea macrophylla | Hma1.2p1_0523F.1 | 5 | CH_hma_523 | 2 | 2 | 0.000333259 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 5 | CH_lsa_489 | 3 | 7 | 0.00000485286 |
| Quercus lobata | 11 | 5 | CH_qlo_1834 | 2 | 3 | 0.000929264 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1221 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_655 | 4 | 4 | 0.000000000114461 |
| Vanilla planifolia | CM028151.1 | 5 | CH_vpl_472 | 3 | 8 | 0.000130956 |
| Vanilla planifolia | CM028152.1 | 5 | CH_vpl_678 | 3 | 13 | 0.000667764 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 6 | CH_amhyb_362 | 2 | 2 | 0.000505051 |
| Hydrangea macrophylla | Hma1.2p1_0523F.1 | 6 | CH_hma_523 | 2 | 2 | 0.000333259 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 6 | CH_lsa_489 | 3 | 7 | 0.00000485286 |
| Quercus lobata | 11 | 6 | CH_qlo_1834 | 2 | 3 | 0.000929264 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1221 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_655 | 4 | 4 | 0.000000000114461 |
| Vanilla planifolia | CM028151.1 | 6 | CH_vpl_472 | 3 | 8 | 0.000130956 |
| Vanilla planifolia | CM028152.1 | 6 | CH_vpl_678 | 3 | 13 | 0.000667764 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |