Functional clusters

Information

  • Type InterPro
  • Description Pre-mRNA-processing factor Prp40

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-7 5 CH_aar_424 2 3 0.000821031
Capsicum annuum PGAv.1.6.scaffold309 5 CH_can_1 30 48 1.80081e-61
Capsicum annuum PGAv.1.6.scaffold575 5 CH_can_361 7 41 0.00000112918
Capsicum annuum PGAv.1.6.scaffold1353 5 CH_can_8 19 30 3.0551e-37
Capsicum annuum PGAv.1.6.scaffold134 5 CH_can_86 10 19 1.09635e-16
Corylus avellana 9 5 CH_cav_741 2 2 0.000460017
Coffea canephora chr2 5 CH_ccan_445 2 6 0.00007666
Citrus clementina scaffold_8 5 CH_ccl_619 2 3 0.000246083
Ceratophyllum demersum 2 5 CH_cde_532 2 2 0.000789796
Carica papaya supercontig_91 5 CH_cpa_388 2 2 0.0000950661
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_856 2 3 0.000807658
Lonicera japonica GWHAAZE00000009 5 CH_lonja_947 2 2 0.000179662
Nicotiana tabacum Nitab4.5_0000001 5 CH_nta_283 2 2 0.000329182
Olea europaea chr5 5 CH_oeu_561 2 2 0.000320273
Petunia axillaris Peaxi162Scf00152 5 CH_pax_461 2 2 0.0000703556
Quercus lobata 12 5 CH_qlo_700 3 3 0.0000000159937
Sequoiadendron giganteum chr4 5 CH_sgi_2129 2 2 0.000146145
Sapria himalayana scaffold34_6262321 5 CH_shi_469 2 4 0.000343063
Zea mays 3 5 CH_zma_339 2 2 0.0000511313
Aethionema arabicum LG-7 6 CH_aar_424 2 3 0.000821031
Capsicum annuum PGAv.1.6.scaffold309 6 CH_can_1 30 48 1.80081e-61
Capsicum annuum PGAv.1.6.scaffold575 6 CH_can_361 7 41 0.00000112918
Capsicum annuum PGAv.1.6.scaffold1353 6 CH_can_8 19 30 3.0551e-37
Capsicum annuum PGAv.1.6.scaffold134 6 CH_can_86 10 19 1.09635e-16
Corylus avellana 9 6 CH_cav_741 2 2 0.000460017
Coffea canephora chr2 6 CH_ccan_445 2 6 0.00007666
Citrus clementina scaffold_8 6 CH_ccl_619 2 3 0.000246083
Ceratophyllum demersum 2 6 CH_cde_532 2 2 0.000789796
Carica papaya supercontig_91 6 CH_cpa_388 2 2 0.0000950661
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_856 2 3 0.000807658
Lonicera japonica GWHAAZE00000009 6 CH_lonja_947 2 2 0.000179662
Nicotiana tabacum Nitab4.5_0000001 6 CH_nta_283 2 2 0.000329182
Olea europaea chr5 6 CH_oeu_561 2 2 0.000320273
Petunia axillaris Peaxi162Scf00152 6 CH_pax_461 2 2 0.0000703556
Quercus lobata 12 6 CH_qlo_700 3 3 0.0000000159937
Sequoiadendron giganteum chr4 6 CH_sgi_2129 2 2 0.000146145
Sapria himalayana scaffold34_6262321 6 CH_shi_469 2 4 0.000343063
Zea mays 3 6 CH_zma_339 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001