Functional clusters

Information

  • Type InterPro
  • Description CLAVATA3/ESR (CLE)-related protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_627 2 2 0.000070497
Arabidopsis lyrata scaffold_4 5 CH_aly_169 3 3 0.00000000653509
Arabidopsis thaliana Chr2 5 CH_ath_212 3 9 0.00000010341
Brassica carinata ChrB01 5 CH_bca_2157 2 2 0.000961939
Brassica carinata ChrB06 5 CH_bca_389 5 79 0.00000000885853
Brassica oleracea C4 5 CH_bol_675 2 2 0.000196117
Brassica rapa A04 5 CH_bra_407 2 2 0.000128794
Corylus avellana 5 5 CH_cav_261 3 4 0.000000352672
Cardamine hirsuta Chr4 5 CH_chi_196 3 3 0.0000000071667
Capsella rubella scaffold_4 5 CH_cru_183 3 3 0.0000000080191
Eutrema salsugineum scaffold_10 5 CH_esa_348 2 2 0.0000761499
Lotus japonicus chr3 5 CH_lja_542 2 2 0.000429046
Manihot esculenta Chromosome15 5 CH_mes_692 2 2 0.000610631
Medicago truncatula chr2 5 CH_mtr_1433 2 2 0.000862813
Nelumbo nucifera chr1 5 CH_nnu_40 6 12 0.00000000000000248932
Petunia axillaris Peaxi162Scf00069 5 CH_pax_459 2 2 0.0000703556
Populus trichocarpa Chr19 5 CH_ptr_756 2 2 0.000578001
Phaseolus vulgaris Chr11 5 CH_pvu_688 2 2 0.000734727
Schrenkiella parvula ch4-6 5 CH_spa_244 2 2 0.000078734
Tarenaya hassleriana NW_010967707.1 5 CH_tha_267 2 2 0.000209541
Trifolium pratense Tp57577_TGAC_v2_scaf_74 5 CH_tpr_705 2 2 0.000454184
Acer truncatum chr6 6 CH_acertr_627 2 2 0.000070497
Arabidopsis lyrata scaffold_4 6 CH_aly_169 3 3 0.00000000653509
Arabidopsis thaliana Chr2 6 CH_ath_212 3 9 0.00000010341
Brassica carinata ChrB01 6 CH_bca_2157 2 2 0.000961939
Brassica carinata ChrB06 6 CH_bca_389 5 79 0.00000000885853
Brassica oleracea C4 6 CH_bol_675 2 2 0.000196117
Brassica rapa A04 6 CH_bra_407 2 2 0.000128794
Corylus avellana 5 6 CH_cav_261 3 4 0.000000352672
Cardamine hirsuta Chr4 6 CH_chi_196 3 3 0.0000000071667
Capsella rubella scaffold_4 6 CH_cru_183 3 3 0.0000000080191
Eutrema salsugineum scaffold_10 6 CH_esa_348 2 2 0.0000761499
Lotus japonicus chr3 6 CH_lja_542 2 2 0.000429046
Manihot esculenta Chromosome15 6 CH_mes_692 2 2 0.000610631
Medicago truncatula chr2 6 CH_mtr_1433 2 2 0.000862813
Nelumbo nucifera chr1 6 CH_nnu_40 6 12 0.00000000000000248932
Petunia axillaris Peaxi162Scf00069 6 CH_pax_459 2 2 0.0000703556
Populus trichocarpa Chr19 6 CH_ptr_756 2 2 0.000578001
Phaseolus vulgaris Chr11 6 CH_pvu_688 2 2 0.000734727
Schrenkiella parvula ch4-6 6 CH_spa_244 2 2 0.000078734
Tarenaya hassleriana NW_010967707.1 6 CH_tha_267 2 2 0.000209541
Trifolium pratense Tp57577_TGAC_v2_scaf_74 6 CH_tpr_705 2 2 0.000454184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001