Functional clusters
Information
- Type InterPro
- Description Ras GTPase-activating protein-binding protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_3 | 5 | CH_aly_281 | 3 | 3 | 0.000000784211 |
| Coffea canephora | chr1 | 5 | CH_ccan_412 | 2 | 3 | 0.0000638836 |
| Durio zibethinus | NW_019167926.1 | 5 | CH_dzi_315 | 3 | 4 | 0.0000105149 |
| Eutrema salsugineum | scaffold_5 | 5 | CH_esa_124 | 4 | 5 | 0.00000000327817 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_761 | 3 | 5 | 0.0000255219 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_306 | 3 | 5 | 0.00000295516 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_510 | 4 | 21 | 0.00000237886 |
| Solanum lycopersicum | SL4.0ch02 | 5 | CH_sly_764 | 3 | 9 | 0.000242626 |
| Theobroma cacao | Chromosome_10 | 5 | CH_tca_194 | 4 | 4 | 0.000000000247519 |
| Arabidopsis lyrata | scaffold_3 | 6 | CH_aly_281 | 3 | 3 | 0.000000784211 |
| Coffea canephora | chr1 | 6 | CH_ccan_412 | 2 | 3 | 0.0000638836 |
| Durio zibethinus | NW_019167926.1 | 6 | CH_dzi_315 | 3 | 4 | 0.0000105149 |
| Eutrema salsugineum | scaffold_5 | 6 | CH_esa_124 | 4 | 5 | 0.00000000327817 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_761 | 3 | 5 | 0.0000255219 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_306 | 3 | 5 | 0.00000295516 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_510 | 4 | 21 | 0.00000237886 |
| Solanum lycopersicum | SL4.0ch02 | 6 | CH_sly_764 | 3 | 9 | 0.000242626 |
| Theobroma cacao | Chromosome_10 | 6 | CH_tca_194 | 4 | 4 | 0.000000000247519 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |