Functional clusters

Information

  • Type InterPro
  • Description Transcription factor Tfc4/TFIIIC-102/Sfc4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC02 5 CH_bca_1687 2 2 0.000320646
Brassica napus C04 5 CH_bna_1400 2 3 0.000556834
Cicer arietinum L. Ca_LG6_v3 5 CH_car_364 2 2 0.000466981
Corylus avellana 5 5 CH_cav_187 3 3 0.00000000881765
Citrus clementina scaffold_3 5 CH_ccl_660 2 2 0.000246093
Ceratophyllum demersum 3 5 CH_cde_245 2 2 0.0000789796
Carica papaya supercontig_21 5 CH_cpa_386 2 2 0.0000950661
Fragaria vesca Fvb6 5 CH_fve_516 3 21 0.000027669
Malus domestica Chr17 5 CH_mdo_1008 2 2 0.000113763
Medicago truncatula chr4 5 CH_mtr_1383 2 4 0.000739503
Physcomitrium patens Chr08 5 CH_ppa_180 2 2 0.0000612726
Quercus lobata 9 5 CH_qlo_1480 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1426 2 4 0.000717527
Sequoiadendron giganteum chr3 5 CH_sgi_444 4 4 0.000000000000346852
Sapria himalayana scaffold5_19632047 5 CH_shi_466 2 4 0.000343063
Trochodendron aralioides group2 5 CH_tar_702 2 2 0.00018011
Brassica carinata ChrC02 6 CH_bca_1687 2 2 0.000320646
Brassica napus C04 6 CH_bna_1400 2 3 0.000556834
Cicer arietinum L. Ca_LG6_v3 6 CH_car_364 2 2 0.000466981
Corylus avellana 5 6 CH_cav_187 3 3 0.00000000881765
Citrus clementina scaffold_3 6 CH_ccl_660 2 2 0.000246093
Ceratophyllum demersum 3 6 CH_cde_245 2 2 0.0000789796
Carica papaya supercontig_21 6 CH_cpa_386 2 2 0.0000950661
Fragaria x ananassa Fvb2-3 6 CH_fan_1087 2 2 0.000518101
Fragaria vesca Fvb6 6 CH_fve_516 3 21 0.000027669
Malus domestica Chr17 6 CH_mdo_1008 2 2 0.000113763
Medicago truncatula chr4 6 CH_mtr_1383 2 4 0.000739503
Physcomitrium patens Chr08 6 CH_ppa_180 2 2 0.0000612726
Quercus lobata 9 6 CH_qlo_1480 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1426 2 4 0.000717527
Sequoiadendron giganteum chr3 6 CH_sgi_444 4 4 0.000000000000346852
Sapria himalayana scaffold5_19632047 6 CH_shi_466 2 4 0.000343063
Trochodendron aralioides group2 6 CH_tar_702 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001