Functional clusters

Information

  • Type InterPro
  • Description Ribonucleases P/MRP protein subunit Pop1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 5 CH_ach_277 2 2 0.0000543213
Avicennia marina ScioBoG_25048_HRSCAF_25167 5 CH_ama_125 2 2 0.0000862218
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_1032 2 2 0.00017963
Coffea canephora chr0 5 CH_ccan_344 2 4 0.0000255534
Ceratophyllum demersum 9 5 CH_cde_244 2 2 0.0000789796
Carya illinoinensis Chr05 5 CH_cil_211 4 7 0.000000000125009
Carica papaya supercontig_18 5 CH_cpa_463 2 3 0.000285185
Davidia involucrata GWHABJS00000007 5 CH_din_588 2 2 0.000150038
Helianthus annuus HanXRQChr06 5 CH_han_924 2 2 0.000115929
Lonicera japonica GWHAAZE00000002 5 CH_lonja_779 2 2 0.0000598874
Malus domestica Chr17 5 CH_mdo_107 6 45 0.000000000000014363
Oryza sativa ssp. japonica chr11 5 CH_osa_500 2 2 0.0000528123
Trochodendron aralioides group0 5 CH_tar_698 2 2 0.00018011
Vitis vinifera chr9 5 CH_vvi_441 3 16 0.0000194235
Actinidia chinensis Lachesis_group9 6 CH_ach_277 2 2 0.0000543213
Avicennia marina ScioBoG_25048_HRSCAF_25167 6 CH_ama_125 2 2 0.0000862218
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_1032 2 2 0.00017963
Coffea canephora chr0 6 CH_ccan_344 2 4 0.0000255534
Ceratophyllum demersum 9 6 CH_cde_244 2 2 0.0000789796
Carya illinoinensis Chr05 6 CH_cil_211 4 7 0.000000000125009
Carica papaya supercontig_18 6 CH_cpa_463 2 3 0.000285185
Davidia involucrata GWHABJS00000007 6 CH_din_588 2 2 0.000150038
Helianthus annuus HanXRQChr06 6 CH_han_924 2 2 0.000115929
Lonicera japonica GWHAAZE00000002 6 CH_lonja_779 2 2 0.0000598874
Malus domestica Chr17 6 CH_mdo_107 6 45 0.000000000000014363
Oryza sativa ssp. japonica chr11 6 CH_osa_500 2 2 0.0000528123
Trochodendron aralioides group0 6 CH_tar_698 2 2 0.00018011
Vitis vinifera chr9 6 CH_vvi_441 3 16 0.0000194235

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001