Functional clusters

Information

  • Type InterPro
  • Description Mediator of RNA polymerase II transcription subunit 16

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold1164 5 CH_can_586 2 2 0.0000826105
Glycine max Gm15 5 CH_gma_749 2 2 0.000227734
Malus domestica Chr05 5 CH_mdo_579 3 10 0.00000103515
Medicago truncatula chr2 5 CH_mtr_282 4 4 0.0000000000145659
Populus trichocarpa Chr04 5 CH_ptr_630 2 2 0.0001734
Sequoiadendron giganteum chr9 5 CH_sgi_820 3 3 0.00000000355983
Sapria himalayana scaffold3_21451142 5 CH_shi_535 2 5 0.000571755
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_701 2 2 0.000454184
Capsicum annuum PGAv.1.6.scaffold1164 6 CH_can_586 2 2 0.0000826105
Glycine max Gm15 6 CH_gma_749 2 2 0.000227734
Malus domestica Chr05 6 CH_mdo_579 3 10 0.00000103515
Medicago truncatula chr2 6 CH_mtr_282 4 4 0.0000000000145659
Populus trichocarpa Chr04 6 CH_ptr_630 2 2 0.0001734
Sequoiadendron giganteum chr9 6 CH_sgi_820 3 3 0.00000000355983
Sapria himalayana scaffold3_21451142 6 CH_shi_535 2 5 0.000571755
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_701 2 2 0.000454184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001