Functional clusters

Information

  • Type InterPro
  • Description NudC family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus A03 5 CH_bna_1520 2 2 0.000835275
Brassica oleracea C7 5 CH_bol_856 2 2 0.000686409
Brassica rapa A03 5 CH_bra_575 2 2 0.00064397
Camellia sinensis var. sinensis Chr7 5 CH_camsi_1097 2 2 0.000137564
Capsicum annuum PGAv.1.6.scaffold1565 5 CH_can_277 3 3 0.0000000409487
Corchorus olitorius AWUE01016262.1 5 CH_col_84 3 7 0.00000447742
Davidia involucrata GWHABJS00000009 5 CH_din_678 2 2 0.000300075
Hydrangea macrophylla Hma1.2p1_0703F.1 5 CH_hma_584 2 2 0.000333259
Magnolia biondii Chr14 5 CH_mbi_1226 2 2 0.000728491
Magnolia biondii Chr07 5 CH_mbi_450 3 4 0.000000283024
Medicago truncatula chr1 5 CH_mtr_509 3 4 0.0000000405134
Papaver somniferum NC_039364.1 5 CH_pso_1210 2 2 0.000630822
Papaver somniferum NC_039367.1 5 CH_pso_1211 2 2 0.000630822
Quercus lobata CM012294 5 CH_qlo_842 3 3 0.000000223911
Sequoiadendron giganteum chr1 5 CH_sgi_2321 2 2 0.000292291
Solanum pennellii Spenn-ch09 5 CH_spe_861 2 2 0.000667186
Solanum tuberosum ST4.03ch09 5 CH_stu_873 2 2 0.000512453
Tarenaya hassleriana NW_010965304.1 5 CH_tha_351 2 2 0.00069847
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_619 2 2 0.000227092
Brassica napus A03 6 CH_bna_1520 2 2 0.000835275
Brassica oleracea C7 6 CH_bol_856 2 2 0.000686409
Brassica rapa A03 6 CH_bra_575 2 2 0.00064397
Camellia sinensis var. sinensis Chr7 6 CH_camsi_1097 2 2 0.000137564
Capsicum annuum PGAv.1.6.scaffold1565 6 CH_can_277 3 3 0.0000000409487
Corchorus olitorius AWUE01016262.1 6 CH_col_84 3 7 0.00000447742
Davidia involucrata GWHABJS00000009 6 CH_din_678 2 2 0.000300075
Hydrangea macrophylla Hma1.2p1_0703F.1 6 CH_hma_584 2 2 0.000333259
Magnolia biondii Chr14 6 CH_mbi_1226 2 2 0.000728491
Magnolia biondii Chr07 6 CH_mbi_450 3 4 0.000000283024
Medicago truncatula chr1 6 CH_mtr_509 3 4 0.0000000405134
Papaver somniferum NC_039364.1 6 CH_pso_1210 2 2 0.000630822
Papaver somniferum NC_039367.1 6 CH_pso_1211 2 2 0.000630822
Quercus lobata CM012294 6 CH_qlo_842 3 3 0.000000223911
Sequoiadendron giganteum chr1 6 CH_sgi_2321 2 2 0.000292291
Solanum pennellii Spenn-ch09 6 CH_spe_861 2 2 0.000667186
Solanum tuberosum ST4.03ch09 6 CH_stu_873 2 2 0.000512453
Tarenaya hassleriana NW_010965304.1 6 CH_tha_351 2 2 0.00069847
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_619 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001