Functional clusters
Information
- Type InterPro
- Description Transcription initiation factor TFIID subunit 2
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 5 | CH_arhy_445 | 3 | 3 | 0.0000000268895 |
| Camellia sinensis var. sinensis | Chr15 | 5 | CH_camsi_1329 | 2 | 5 | 0.000458516 |
| Corylus avellana | 7 | 5 | CH_cav_111 | 4 | 5 | 0.00000000000676071 |
| Carica papaya | supercontig_13 | 5 | CH_cpa_182 | 3 | 8 | 0.00000075901 |
| Gossypium hirsutum | A07 | 5 | CH_ghi_1138 | 2 | 2 | 0.000400523 |
| Gossypium hirsutum | D07 | 5 | CH_ghi_212 | 4 | 4 | 0.000000000000856721 |
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_386 | 3 | 3 | 0.000000021519 |
| Malus domestica | Chr06 | 5 | CH_mdo_1196 | 2 | 3 | 0.00034128 |
| Oryza sativa ssp. japonica | chr09 | 5 | CH_osa_497 | 2 | 2 | 0.0000528123 |
| Rhododendron simsii | chr08 | 5 | CH_rsi_691 | 2 | 2 | 0.0000645307 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_1824 | 2 | 2 | 0.0000487151 |
| Sapria himalayana | scaffold32_6892495 | 5 | CH_shi_173 | 3 | 8 | 0.000000274615 |
| Trochodendron aralioides | group13 | 5 | CH_tar_694 | 2 | 2 | 0.00018011 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_487 | 2 | 2 | 0.0000929238 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 6 | CH_arhy_445 | 3 | 3 | 0.0000000268895 |
| Camellia sinensis var. sinensis | Chr15 | 6 | CH_camsi_1329 | 2 | 5 | 0.000458516 |
| Corylus avellana | 7 | 6 | CH_cav_111 | 4 | 5 | 0.00000000000676071 |
| Carica papaya | supercontig_13 | 6 | CH_cpa_182 | 3 | 8 | 0.00000075901 |
| Gossypium hirsutum | A07 | 6 | CH_ghi_1138 | 2 | 2 | 0.000400523 |
| Gossypium hirsutum | D07 | 6 | CH_ghi_212 | 4 | 4 | 0.000000000000856721 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_386 | 3 | 3 | 0.000000021519 |
| Malus domestica | Chr06 | 6 | CH_mdo_1196 | 2 | 3 | 0.00034128 |
| Oryza sativa ssp. japonica | chr09 | 6 | CH_osa_497 | 2 | 2 | 0.0000528123 |
| Rhododendron simsii | chr08 | 6 | CH_rsi_691 | 2 | 2 | 0.0000645307 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_1824 | 2 | 2 | 0.0000487151 |
| Sapria himalayana | scaffold32_6892495 | 6 | CH_shi_173 | 3 | 8 | 0.000000274615 |
| Trochodendron aralioides | group13 | 6 | CH_tar_694 | 2 | 2 | 0.00018011 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_487 | 2 | 2 | 0.0000929238 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |