Functional clusters

Information

  • Type InterPro
  • Description Anaphase-promoting complex subunit 5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00032 5 CH_atr_242 3 4 0.000000378627
Lupinus albus Lalb_Chr10 5 CH_lal_138 3 3 0.00000000413171
Malus domestica Chr17 5 CH_mdo_1001 2 2 0.000113763
Pisum sativum chr2LG1 5 CH_psa_465 2 2 0.0000521635
Rhododendron simsii chr12 5 CH_rsi_458 3 9 0.000000524606
Sequoiadendron giganteum chr1 5 CH_sgi_1994 2 3 0.000146142
Sapria himalayana scaffold78_2020968 5 CH_shi_94 3 3 0.00000000490454
Trochodendron aralioides group3 5 CH_tar_693 2 2 0.00018011
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_486 2 2 0.0000929238
Amborella trichopoda AmTr_v1.0_scaffold00032 6 CH_atr_242 3 4 0.000000378627
Lupinus albus Lalb_Chr10 6 CH_lal_138 3 3 0.00000000413171
Malus domestica Chr17 6 CH_mdo_1001 2 2 0.000113763
Pisum sativum chr2LG1 6 CH_psa_465 2 2 0.0000521635
Rhododendron simsii chr12 6 CH_rsi_458 3 9 0.000000524606
Sequoiadendron giganteum chr1 6 CH_sgi_1994 2 3 0.000146142
Sapria himalayana scaffold78_2020968 6 CH_shi_94 3 3 0.00000000490454
Trochodendron aralioides group3 6 CH_tar_693 2 2 0.00018011
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_486 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001