Functional clusters

Information

  • Type InterPro
  • Description E3 ubiquitin-protein ligase RFWD3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 5 CH_acertr_105 4 6 0.0000000000157667
Camellia sinensis var. sinensis Chr7 5 CH_camsi_953 2 2 0.0000458547
Corylus avellana 10 5 CH_cav_530 2 2 0.0000766695
Coffea canephora chr6 5 CH_ccan_502 2 9 0.000153318
Carica papaya supercontig_102 5 CH_cpa_377 2 2 0.0000950661
Glycine max Gm19 5 CH_gma_654 2 2 0.000113867
Lotus japonicus chr1 5 CH_lja_190 3 6 0.00000015339
Lactuca sativa Lsat_1_v8_lg_6 5 CH_lsa_707 2 2 0.000154202
Malus domestica Chr01 5 CH_mdo_1119 2 2 0.000227527
Malus domestica Chr12 5 CH_mdo_1120 2 2 0.000227527
Nelumbo nucifera chr2 5 CH_nnu_389 2 4 0.0000481684
Punica granatum NC_045131.1 5 CH_pgr_317 3 16 0.00000472736
Prunus persica Pp07 5 CH_ppe_809 2 3 0.000671324
Papaver somniferum NC_039366.1 5 CH_pso_1233 2 3 0.000675858
Papaver somniferum NW_020628818.1 5 CH_pso_365 3 3 0.00000000761368
Simmondsia chinensis GWHAASQ00000002 5 CH_sci_310 2 2 0.0000851426
Sequoiadendron giganteum chr6 5 CH_sgi_1136 3 3 0.000000199351
Solanum tuberosum ST4.03ch09 5 CH_stu_612 2 2 0.0000512453
Zea mays 9 5 CH_zma_401 2 2 0.000153394
Acer truncatum chr8 6 CH_acertr_105 4 6 0.0000000000157667
Camellia sinensis var. sinensis Chr7 6 CH_camsi_953 2 2 0.0000458547
Corylus avellana 10 6 CH_cav_530 2 2 0.0000766695
Coffea canephora chr6 6 CH_ccan_502 2 9 0.000153318
Carica papaya supercontig_102 6 CH_cpa_377 2 2 0.0000950661
Glycine max Gm19 6 CH_gma_654 2 2 0.000113867
Lotus japonicus chr1 6 CH_lja_190 3 6 0.00000015339
Lactuca sativa Lsat_1_v8_lg_6 6 CH_lsa_707 2 2 0.000154202
Malus domestica Chr01 6 CH_mdo_1119 2 2 0.000227527
Malus domestica Chr12 6 CH_mdo_1120 2 2 0.000227527
Nelumbo nucifera chr2 6 CH_nnu_389 2 4 0.0000481684
Punica granatum NC_045131.1 6 CH_pgr_317 3 16 0.00000472736
Prunus persica Pp07 6 CH_ppe_809 2 3 0.000671324
Papaver somniferum NC_039366.1 6 CH_pso_1233 2 3 0.000675858
Papaver somniferum NW_020628818.1 6 CH_pso_365 3 3 0.00000000761368
Simmondsia chinensis GWHAASQ00000002 6 CH_sci_310 2 2 0.0000851426
Sequoiadendron giganteum chr6 6 CH_sgi_1136 3 3 0.000000199351
Solanum tuberosum ST4.03ch09 6 CH_stu_612 2 2 0.0000512453
Zea mays 9 6 CH_zma_401 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001