Functional clusters
Information
- Type InterPro
- Description Mitochondrial glycoprotein superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB01 | 5 | CH_bca_1194 | 3 | 6 | 0.0000315123 |
| Brassica napus | C03 | 5 | CH_bna_1068 | 4 | 43 | 0.000108817 |
| Brassica napus | A03 | 5 | CH_bna_958 | 4 | 34 | 0.0000409776 |
| Brassica oleracea | C3 | 5 | CH_bol_483 | 4 | 37 | 0.0000210347 |
| Brassica rapa | A03 | 5 | CH_bra_295 | 4 | 31 | 0.0000135115 |
| Papaver somniferum | NC_039366.1 | 5 | CH_pso_72 | 7 | 7 | 1.82406e-18 |
| Quercus lobata | 8 | 5 | CH_qlo_841 | 3 | 3 | 0.000000223911 |
| Brassica carinata | ChrB01 | 6 | CH_bca_1194 | 3 | 6 | 0.0000315123 |
| Brassica napus | C03 | 6 | CH_bna_1068 | 4 | 43 | 0.000108817 |
| Brassica napus | A03 | 6 | CH_bna_958 | 4 | 34 | 0.0000409776 |
| Brassica oleracea | C3 | 6 | CH_bol_483 | 4 | 37 | 0.0000210347 |
| Brassica rapa | A03 | 6 | CH_bra_295 | 4 | 31 | 0.0000135115 |
| Papaver somniferum | NC_039366.1 | 6 | CH_pso_72 | 7 | 7 | 1.82406e-18 |
| Quercus lobata | 8 | 6 | CH_qlo_841 | 3 | 3 | 0.000000223911 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |