Functional clusters
Information
- Type InterPro
- Description Mediator complex subunit 15, KIX domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 5 | CH_aag_24 | 5 | 7 | 0.00000000000000653549 |
| Acer truncatum | chr6 | 5 | CH_acertr_492 | 3 | 10 | 0.0000312801 |
| Aquilegia oxysepala | CHR01 | 5 | CH_aox_64 | 4 | 5 | 0.000000000038689 |
| Brassica napus | A06 | 5 | CH_bna_69 | 6 | 9 | 2.25907e-16 |
| Brassica oleracea | C5 | 5 | CH_bol_266 | 3 | 3 | 0.000000192312 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_158 | 3 | 3 | 0.00000000646789 |
| Citrus clementina | scaffold_7 | 5 | CH_ccl_215 | 4 | 9 | 0.00000000104301 |
| Ceratophyllum demersum | 2 | 5 | CH_cde_441 | 2 | 2 | 0.000473878 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_116 | 4 | 4 | 0.000000000004954 |
| Carya illinoinensis | Chr02 | 5 | CH_cil_119 | 5 | 9 | 0.0000000000000836856 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1251 | 5 | CH_cqu_860 | 2 | 2 | 0.000284293 |
| Cucumis sativus L. | chr7 | 5 | CH_csa_424 | 2 | 2 | 0.000250428 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_641 | 2 | 2 | 0.000134617 |
| Erythranthe guttata | scaffold_2 | 5 | CH_egut_619 | 3 | 37 | 0.000246652 |
| Eutrema salsugineum | scaffold_5 | 5 | CH_esa_417 | 2 | 2 | 0.00022845 |
| Fragaria vesca | Fvb3 | 5 | CH_fve_212 | 4 | 8 | 0.00000000150218 |
| Gossypium hirsutum | A10 | 5 | CH_ghi_1278 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D05 | 5 | CH_ghi_1279 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D10 | 5 | CH_ghi_1280 | 2 | 2 | 0.000747644 |
| Glycine max | Gm07 | 5 | CH_gma_823 | 2 | 2 | 0.000379557 |
| Gossypium raimondii | Chr11 | 5 | CH_gra_575 | 2 | 2 | 0.000321664 |
| Gossypium raimondii | Chr09 | 5 | CH_gra_576 | 2 | 2 | 0.000321664 |
| Helianthus annuus | HanXRQChr03 | 5 | CH_han_45 | 7 | 7 | 8.65578e-23 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_24 | 8 | 8 | 1.34443e-26 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_388 | 3 | 3 | 0.0000000707617 |
| Manihot esculenta | Chromosome11 | 5 | CH_mes_590 | 2 | 2 | 0.000183189 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_692 | 2 | 2 | 0.000521635 |
| Phaseolus vulgaris | Chr05 | 5 | CH_pvu_549 | 2 | 2 | 0.000220418 |
| Quercus lobata | 5 | 5 | CH_qlo_280 | 8 | 78 | 0.00000000000000209582 |
| Salvia bowleyana | GWHASIU00000004 | 5 | CH_sbo_495 | 2 | 2 | 0.000045498 |
| Salix brachista | GWHAAZH00000003 | 5 | CH_sbr_194 | 3 | 3 | 0.00000000595633 |
| Sechium edule | LG10 | 5 | CH_sed_66 | 4 | 4 | 0.0000000000163416 |
| Schrenkiella parvula | ch1-1 | 5 | CH_spa_95 | 3 | 3 | 0.0000000371957 |
| Theobroma cacao | Chromosome_6 | 5 | CH_tca_273 | 3 | 4 | 0.0000000321834 |
| Tarenaya hassleriana | NW_010964598.1 | 5 | CH_tha_303 | 2 | 2 | 0.000419082 |
| Vigna mungo | CM024079.1 | 5 | CH_vmu_601 | 2 | 2 | 0.000646141 |
| Vitis vinifera | chrUn | 5 | CH_vvi_457 | 3 | 3 | 0.0000284314 |
| Vitis vinifera | chr9 | 5 | CH_vvi_549 | 3 | 4 | 0.00011364 |
| Vitis vinifera | chr13_random | 5 | CH_vvi_92 | 7 | 10 | 0.00000000000000216334 |
| Anthoceros agrestis | Sc2ySwM_228 | 6 | CH_aag_24 | 5 | 7 | 0.00000000000000653549 |
| Acer truncatum | chr6 | 6 | CH_acertr_492 | 3 | 10 | 0.0000312801 |
| Aquilegia oxysepala | CHR01 | 6 | CH_aox_64 | 4 | 5 | 0.000000000038689 |
| Brassica napus | A06 | 6 | CH_bna_69 | 6 | 9 | 2.25907e-16 |
| Brassica oleracea | C5 | 6 | CH_bol_266 | 3 | 3 | 0.000000192312 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_158 | 3 | 3 | 0.00000000646789 |
| Citrus clementina | scaffold_7 | 6 | CH_ccl_215 | 4 | 9 | 0.00000000104301 |
| Ceratophyllum demersum | 2 | 6 | CH_cde_441 | 2 | 2 | 0.000473878 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_116 | 4 | 4 | 0.000000000004954 |
| Carya illinoinensis | Chr02 | 6 | CH_cil_119 | 5 | 9 | 0.0000000000000836856 |
| Cucumis melo | chr01 | 6 | CH_cme_383 | 2 | 2 | 0.000200133 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1251 | 6 | CH_cqu_860 | 2 | 2 | 0.000284293 |
| Cucumis sativus L. | chr7 | 6 | CH_csa_424 | 2 | 2 | 0.000250428 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_641 | 2 | 2 | 0.000134617 |
| Erythranthe guttata | scaffold_2 | 6 | CH_egut_619 | 3 | 37 | 0.000246652 |
| Eutrema salsugineum | scaffold_5 | 6 | CH_esa_417 | 2 | 2 | 0.00022845 |
| Fragaria x ananassa | Fvb3-3 | 6 | CH_fan_687 | 3 | 7 | 0.0000204814 |
| Fragaria x ananassa | Fvb3-4 | 6 | CH_fan_819 | 3 | 11 | 0.0000965062 |
| Fragaria vesca | Fvb3 | 6 | CH_fve_212 | 4 | 8 | 0.00000000150218 |
| Gossypium hirsutum | A10 | 6 | CH_ghi_1278 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D05 | 6 | CH_ghi_1279 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D10 | 6 | CH_ghi_1280 | 2 | 2 | 0.000747644 |
| Glycine max | Gm07 | 6 | CH_gma_823 | 2 | 2 | 0.000379557 |
| Gossypium raimondii | Chr11 | 6 | CH_gra_575 | 2 | 2 | 0.000321664 |
| Gossypium raimondii | Chr09 | 6 | CH_gra_576 | 2 | 2 | 0.000321664 |
| Helianthus annuus | HanXRQChr03 | 6 | CH_han_45 | 7 | 7 | 8.65578e-23 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_24 | 8 | 8 | 1.34443e-26 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_388 | 3 | 3 | 0.0000000707617 |
| Manihot esculenta | Chromosome11 | 6 | CH_mes_590 | 2 | 2 | 0.000183189 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_692 | 2 | 2 | 0.000521635 |
| Phaseolus vulgaris | Chr05 | 6 | CH_pvu_549 | 2 | 2 | 0.000220418 |
| Quercus lobata | 5 | 6 | CH_qlo_280 | 8 | 78 | 0.00000000000000209582 |
| Salvia bowleyana | GWHASIU00000004 | 6 | CH_sbo_495 | 2 | 2 | 0.000045498 |
| Salix brachista | GWHAAZH00000003 | 6 | CH_sbr_194 | 3 | 3 | 0.00000000595633 |
| Sechium edule | LG10 | 6 | CH_sed_66 | 4 | 4 | 0.0000000000163416 |
| Schrenkiella parvula | ch1-1 | 6 | CH_spa_95 | 3 | 3 | 0.0000000371957 |
| Theobroma cacao | Chromosome_6 | 6 | CH_tca_273 | 3 | 4 | 0.0000000321834 |
| Tarenaya hassleriana | NW_010964598.1 | 6 | CH_tha_303 | 2 | 2 | 0.000419082 |
| Vigna mungo | CM024079.1 | 6 | CH_vmu_601 | 2 | 2 | 0.000646141 |
| Vitis vinifera | chrUn | 6 | CH_vvi_457 | 3 | 3 | 0.0000284314 |
| Vitis vinifera | chr9 | 6 | CH_vvi_549 | 3 | 4 | 0.00011364 |
| Vitis vinifera | chr13_random | 6 | CH_vvi_92 | 7 | 10 | 0.00000000000000216334 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |