Functional clusters

Information

  • Type InterPro
  • Description 26S proteasome regulatory subunit 8

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 5 CH_aly_589 2 2 0.000396027
Arabidopsis thaliana Chr5 5 CH_ath_409 2 3 0.0000859463
Cardamine hirsuta Chr6 5 CH_chi_225 3 3 0.0000000286668
Capsella rubella scaffold_6 5 CH_cru_522 2 2 0.000219346
Eutrema salsugineum scaffold_2 5 CH_esa_322 2 2 0.0000761499
Lupinus albus Lalb_Chr01 5 CH_lal_484 2 2 0.000157447
Sapria himalayana scaffold25_7721883 5 CH_shi_473 2 2 0.000343083
Solanum lycopersicum SL4.0ch05 5 CH_sly_674 2 3 0.000176077
Solanum pennellii Spenn-ch05 5 CH_spe_894 2 7 0.000933956
Arabidopsis lyrata scaffold_6 6 CH_aly_589 2 2 0.000396027
Arabidopsis thaliana Chr5 6 CH_ath_409 2 3 0.0000859463
Cardamine hirsuta Chr6 6 CH_chi_225 3 3 0.0000000286668
Capsella rubella scaffold_6 6 CH_cru_522 2 2 0.000219346
Eutrema salsugineum scaffold_2 6 CH_esa_322 2 2 0.0000761499
Lupinus albus Lalb_Chr01 6 CH_lal_484 2 2 0.000157447
Sapria himalayana scaffold25_7721883 6 CH_shi_473 2 2 0.000343083
Solanum lycopersicum SL4.0ch05 6 CH_sly_674 2 3 0.000176077
Solanum pennellii Spenn-ch05 6 CH_spe_894 2 7 0.000933956

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001