Functional clusters

Information

  • Type InterPro
  • Description FACT complex subunit Spt16, peptidase M24-like domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 5 CH_acertr_727 2 2 0.000211491
Actinidia chinensis Lachesis_group12 5 CH_ach_258 2 2 0.0000543213
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 5 CH_arhy_933 2 2 0.000089815
Capsicum annuum PGAv.1.6.scaffold1374 5 CH_can_664 2 2 0.000247831
Corylus avellana 2 5 CH_cav_479 2 2 0.0000766695
Citrus clementina scaffold_6 5 CH_ccl_507 2 2 0.0000820311
Carpinus fangiana Cfa02 5 CH_cfa_395 2 2 0.0000757346
Carya illinoinensis Chr07 5 CH_cil_307 3 5 0.0000000576263
Davidia involucrata GWHABJS00000005 5 CH_din_636 2 2 0.000300075
Davidia involucrata GWHABJS00000002 5 CH_din_637 2 2 0.000300075
Glycine max Gm11 5 CH_gma_709 2 2 0.000227734
Glycine max Gm18 5 CH_gma_905 2 3 0.000683172
Gossypium raimondii Chr13 5 CH_gra_487 2 2 0.000160832
Lonicera japonica GWHAAZE00000005 5 CH_lonja_708 2 2 0.0000598874
Malus domestica Chr12 5 CH_mdo_1073 2 2 0.000227527
Malus domestica Chr04 5 CH_mdo_1074 2 2 0.000227527
Manihot esculenta Chromosome04 5 CH_mes_567 2 2 0.000183189
Prunus persica Pp06 5 CH_ppe_575 2 2 0.0000745962
Populus trichocarpa Chr13 5 CH_ptr_662 2 2 0.000346801
Populus trichocarpa Chr05 5 CH_ptr_663 2 2 0.000346801
Phaseolus vulgaris Chr06 5 CH_pvu_428 2 2 0.0000734727
Rhododendron simsii chr11 5 CH_rsi_866 2 2 0.000387184
Salix brachista GWHAAZH00000013 5 CH_sbr_641 2 2 0.00063014
Salix brachista GWHAAZH00000005 5 CH_sbr_642 2 2 0.00063014
Solanum pennellii Spenn-ch01 5 CH_spe_631 2 2 0.000133437
Solanum tuberosum ST4.03ch01 5 CH_stu_685 2 2 0.000153736
Theobroma cacao Chromosome_5 5 CH_tca_515 2 2 0.0000732386
Acer truncatum chr12 6 CH_acertr_727 2 2 0.000211491
Actinidia chinensis Lachesis_group12 6 CH_ach_258 2 2 0.0000543213
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 6 CH_arhy_933 2 2 0.000089815
Capsicum annuum PGAv.1.6.scaffold1374 6 CH_can_664 2 2 0.000247831
Corylus avellana 2 6 CH_cav_479 2 2 0.0000766695
Citrus clementina scaffold_6 6 CH_ccl_507 2 2 0.0000820311
Carpinus fangiana Cfa02 6 CH_cfa_395 2 2 0.0000757346
Carya illinoinensis Chr07 6 CH_cil_307 3 5 0.0000000576263
Davidia involucrata GWHABJS00000005 6 CH_din_636 2 2 0.000300075
Davidia involucrata GWHABJS00000002 6 CH_din_637 2 2 0.000300075
Glycine max Gm11 6 CH_gma_709 2 2 0.000227734
Glycine max Gm18 6 CH_gma_905 2 3 0.000683172
Gossypium raimondii Chr13 6 CH_gra_487 2 2 0.000160832
Lonicera japonica GWHAAZE00000005 6 CH_lonja_708 2 2 0.0000598874
Malus domestica Chr12 6 CH_mdo_1073 2 2 0.000227527
Malus domestica Chr04 6 CH_mdo_1074 2 2 0.000227527
Manihot esculenta Chromosome04 6 CH_mes_567 2 2 0.000183189
Prunus persica Pp06 6 CH_ppe_575 2 2 0.0000745962
Populus trichocarpa Chr13 6 CH_ptr_662 2 2 0.000346801
Populus trichocarpa Chr05 6 CH_ptr_663 2 2 0.000346801
Phaseolus vulgaris Chr06 6 CH_pvu_428 2 2 0.0000734727
Rhododendron simsii chr11 6 CH_rsi_866 2 2 0.000387184
Salix brachista GWHAAZH00000013 6 CH_sbr_641 2 2 0.00063014
Salix brachista GWHAAZH00000005 6 CH_sbr_642 2 2 0.00063014
Solanum pennellii Spenn-ch01 6 CH_spe_631 2 2 0.000133437
Solanum tuberosum ST4.03ch01 6 CH_stu_685 2 2 0.000153736
Theobroma cacao Chromosome_5 6 CH_tca_515 2 2 0.0000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001