Functional clusters

Information

  • Type InterPro
  • Description E3 ubiquitin-protein ligase RBBP6 family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 5 CH_aag_294 2 2 0.00024077
Camellia sinensis var. sinensis Chr12 5 CH_camsi_951 2 2 0.0000458547
Ceratophyllum demersum 5 5 CH_cde_526 2 2 0.000789796
Lupinus albus Lalb_Chr05 5 CH_lal_632 2 2 0.000314895
Lonicera japonica GWHAAZE00000007 5 CH_lonja_524 3 6 0.00000107574
Sapria himalayana scaffold4_21100006 5 CH_shi_494 2 2 0.000343083
Tripterygium wilfordii NC_052235.1 5 CH_twi_460 2 2 0.000334504
Utricularia gibba unitig_748 5 CH_ugi_272 2 2 0.000246144
Anthoceros agrestis Sc2ySwM_228 6 CH_aag_294 2 2 0.00024077
Camellia sinensis var. sinensis Chr12 6 CH_camsi_951 2 2 0.0000458547
Ceratophyllum demersum 5 6 CH_cde_526 2 2 0.000789796
Lupinus albus Lalb_Chr05 6 CH_lal_632 2 2 0.000314895
Lonicera japonica GWHAAZE00000007 6 CH_lonja_524 3 6 0.00000107574
Sapria himalayana scaffold4_21100006 6 CH_shi_494 2 2 0.000343083
Tripterygium wilfordii NC_052235.1 6 CH_twi_460 2 2 0.000334504
Utricularia gibba unitig_748 6 CH_ugi_272 2 2 0.000246144

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001