Functional clusters

Information

  • Type InterPro
  • Description VPRBP/DCAF1 family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr7 5 CH_acertr_617 2 2 0.000070497
Brassica carinata Contig525 5 CH_bca_1448 2 2 0.000128259
Davidia involucrata GWHABJS00000003 5 CH_din_672 2 2 0.000300075
Davidia involucrata GWHABJS00000017 5 CH_din_673 2 2 0.000300075
Erythranthe guttata scaffold_5 5 CH_egut_343 3 7 0.00000111317
Gossypium hirsutum D08 5 CH_ghi_1007 2 3 0.000240309
Lotus japonicus chr1 5 CH_lja_539 2 2 0.000429046
Magnolia biondii Chr09 5 CH_mbi_998 2 4 0.000291382
Punica granatum NC_045134.1 5 CH_pgr_430 2 2 0.0000750356
Physcomitrium patens Chr01 5 CH_ppa_264 2 2 0.000183818
Sequoiadendron giganteum chr8 5 CH_sgi_815 3 3 0.00000000355983
Selenicereus undatus Scaffold_19641 5 CH_sun_284 2 2 0.000217992
Acer truncatum chr7 6 CH_acertr_617 2 2 0.000070497
Brassica carinata Contig525 6 CH_bca_1448 2 2 0.000128259
Davidia involucrata GWHABJS00000003 6 CH_din_672 2 2 0.000300075
Davidia involucrata GWHABJS00000017 6 CH_din_673 2 2 0.000300075
Erythranthe guttata scaffold_5 6 CH_egut_343 3 7 0.00000111317
Gossypium hirsutum D08 6 CH_ghi_1007 2 3 0.000240309
Lotus japonicus chr1 6 CH_lja_539 2 2 0.000429046
Magnolia biondii Chr09 6 CH_mbi_998 2 4 0.000291382
Punica granatum NC_045134.1 6 CH_pgr_430 2 2 0.0000750356
Physcomitrium patens Chr01 6 CH_ppa_264 2 2 0.000183818
Sequoiadendron giganteum chr8 6 CH_sgi_815 3 3 0.00000000355983
Selenicereus undatus Scaffold_19641 6 CH_sun_284 2 2 0.000217992

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001