Functional clusters

Information

  • Type InterPro
  • Description Translational activator Gcn1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group22 5 CH_ach_53 4 5 0.000000000302934
Arabidopsis lyrata scaffold_2 5 CH_aly_656 2 5 0.000659979
Amborella trichopoda AmTr_v1.0_scaffold00039 5 CH_atr_470 2 3 0.000238313
Corylus avellana 2 5 CH_cav_528 2 2 0.0000766695
Ceratophyllum demersum 7 5 CH_cde_284 2 3 0.000236929
Cardamine hirsuta Chr2 5 CH_chi_509 2 2 0.0000691204
Carya illinoinensis Chr07 5 CH_cil_584 2 2 0.0000619828
Carica papaya supercontig_51 5 CH_cpa_371 2 2 0.0000950661
Daucus carota DCARv2_Chr9 5 CH_dca_616 2 2 0.000382665
Hydrangea macrophylla Hma1.2p1_0123F.1 5 CH_hma_444 2 2 0.000111086
Lonicera japonica GWHAAZE00000002 5 CH_lonja_412 3 5 0.0000000537959
Malus domestica Chr04 5 CH_mdo_1353 2 4 0.000682538
Petunia axillaris Peaxi162Scf00071 5 CH_pax_451 2 2 0.0000703556
Pisum sativum chr2LG1 5 CH_psa_603 2 4 0.000312965
Salvia bowleyana GWHASIU00000001 5 CH_sbo_584 2 2 0.000136494
Sequoiadendron giganteum chr1 5 CH_sgi_592 4 6 0.0000000000260117
Solanum lycopersicum SL4.0ch04 5 CH_sly_615 2 2 0.0000586941
Trochodendron aralioides group1 5 CH_tar_692 2 2 0.00018011
Utricularia gibba unitig_37 5 CH_ugi_189 2 2 0.0000820479
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_480 2 2 0.0000929238
Zea mays 4 5 CH_zma_399 2 2 0.000153394
Actinidia chinensis Lachesis_group22 6 CH_ach_53 4 5 0.000000000302934
Arabidopsis lyrata scaffold_2 6 CH_aly_656 2 5 0.000659979
Amborella trichopoda AmTr_v1.0_scaffold00039 6 CH_atr_470 2 3 0.000238313
Corylus avellana 2 6 CH_cav_528 2 2 0.0000766695
Ceratophyllum demersum 7 6 CH_cde_284 2 3 0.000236929
Cardamine hirsuta Chr2 6 CH_chi_509 2 2 0.0000691204
Carya illinoinensis Chr07 6 CH_cil_584 2 2 0.0000619828
Carica papaya supercontig_51 6 CH_cpa_371 2 2 0.0000950661
Daucus carota DCARv2_Chr9 6 CH_dca_616 2 2 0.000382665
Hydrangea macrophylla Hma1.2p1_0123F.1 6 CH_hma_444 2 2 0.000111086
Lonicera japonica GWHAAZE00000002 6 CH_lonja_412 3 5 0.0000000537959
Malus domestica Chr04 6 CH_mdo_1353 2 4 0.000682538
Petunia axillaris Peaxi162Scf00071 6 CH_pax_451 2 2 0.0000703556
Pisum sativum chr2LG1 6 CH_psa_603 2 4 0.000312965
Salvia bowleyana GWHASIU00000001 6 CH_sbo_584 2 2 0.000136494
Sequoiadendron giganteum chr1 6 CH_sgi_592 4 6 0.0000000000260117
Solanum lycopersicum SL4.0ch04 6 CH_sly_615 2 2 0.0000586941
Trochodendron aralioides group1 6 CH_tar_692 2 2 0.00018011
Utricularia gibba unitig_37 6 CH_ugi_189 2 2 0.0000820479
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_480 2 2 0.0000929238
Zea mays 4 6 CH_zma_399 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001