Functional clusters

Information

  • Type InterPro
  • Description Peptidase family A1 domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB04 5 CH_bca_268 5 5 0.000000000414347
Brassica napus C03 5 CH_bna_378 5 8 0.0000000247577
Lonicera japonica GWHAAZE00000145 5 CH_lonja_243 8 28 0.00000000000774394
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_207 6 13 0.000000000398599
Physcomitrium patens Chr26 5 CH_ppa_338 3 6 0.000410788
Striga asiatica scaffold28 5 CH_sas_76 5 17 0.00000221032
Sequoiadendron giganteum chr3 5 CH_sgi_145 10 13 9.97676e-24
Theobroma cacao Chromosome_9 5 CH_tca_315 4 4 0.000000160005
Theobroma cacao Chromosome_7 5 CH_tca_560 3 3 0.000106563
Vitis vinifera chr8 5 CH_vvi_557 3 4 0.000140828
Brassica carinata ChrB04 6 CH_bca_268 5 5 0.000000000414347
Brassica napus C03 6 CH_bna_378 5 8 0.0000000247577
Lonicera japonica GWHAAZE00000145 6 CH_lonja_243 8 28 0.00000000000774394
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_207 6 13 0.000000000398599
Physcomitrium patens Chr26 6 CH_ppa_338 3 6 0.000410788
Striga asiatica scaffold28 6 CH_sas_76 5 17 0.00000221032
Sequoiadendron giganteum chr3 6 CH_sgi_145 10 13 9.97676e-24
Theobroma cacao Chromosome_9 6 CH_tca_315 4 4 0.000000160005
Theobroma cacao Chromosome_7 6 CH_tca_560 3 3 0.000106563
Vitis vinifera chr8 6 CH_vvi_557 3 4 0.000140828

Available child term results

Ontology identifier Description Number of clusters
IPR033869 Phytepsin 6
IPR033873 CND41-like 18
IPR034161 Pepsin-like domain, plant 145
IPR034164 Pepsin-like domain 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001