Functional clusters
Information
- Type InterPro
- Description Pepsin-like domain, plant
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR01 | 5 | CH_aox_134 | 4 | 4 | 0.0000000556542 |
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_4 | 9 | 9 | 6.81196e-23 |
| Arabidopsis thaliana | Chr2 | 5 | CH_ath_323 | 5 | 61 | 0.00000819741 |
| Brassica carinata | ChrB06 | 5 | CH_bca_1272 | 3 | 3 | 0.0000629784 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_1385 | 3 | 9 | 0.000607898 |
| Capsicum annuum | PGAv.1.6.scaffold561 | 5 | CH_can_37 | 10 | 11 | 1.29385e-24 |
| Cicer arietinum L. | Ca_LG7_v3 | 5 | CH_car_241 | 4 | 18 | 0.000101636 |
| Coffea canephora | chr5 | 5 | CH_ccan_190 | 4 | 50 | 0.000000206606 |
| Cardamine hirsuta | Chr2 | 5 | CH_chi_432 | 3 | 3 | 0.0000261871 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1214 | 5 | CH_cqu_121 | 6 | 7 | 0.000000000000352116 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3035 | 5 | CH_cqu_56 | 8 | 10 | 1.98086e-18 |
| Capsella rubella | scaffold_4 | 5 | CH_cru_375 | 5 | 33 | 0.0000137977 |
| Cucumis sativus L. | chr4 | 5 | CH_csa_299 | 3 | 3 | 0.0000342433 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 5 | CH_eca_567 | 3 | 5 | 0.0000610858 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_650 | 4 | 4 | 0.0000000216301 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_998 | 3 | 3 | 0.0000254862 |
| Erythranthe guttata | scaffold_1 | 5 | CH_egut_166 | 7 | 16 | 0.000000000142342 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_306 | 6 | 21 | 0.00000029082 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_342 | 4 | 4 | 0.00000100136 |
| Erythranthe guttata | scaffold_2 | 5 | CH_egut_43 | 10 | 10 | 1.38852e-22 |
| Erythranthe guttata | scaffold_10 | 5 | CH_egut_638 | 3 | 3 | 0.000416703 |
| Erythranthe guttata | scaffold_13 | 5 | CH_egut_82 | 8 | 9 | 2.56935e-16 |
| Fragaria vesca | Fvb7 | 5 | CH_fve_842 | 3 | 6 | 0.000949157 |
| Gossypium hirsutum | D13 | 5 | CH_ghi_889 | 3 | 3 | 0.0000845729 |
| Glycine max | Gm13 | 5 | CH_gma_388 | 5 | 17 | 0.00000091924 |
| Glycine max | Gm08 | 5 | CH_gma_426 | 6 | 49 | 0.00000236861 |
| Lupinus albus | Lalb_Chr20 | 5 | CH_lal_258 | 4 | 4 | 0.00000101136 |
| Lupinus albus | Lalb_Chr18 | 5 | CH_lal_259 | 4 | 4 | 0.00000101136 |
| Lupinus albus | Lalb_Chr15 | 5 | CH_lal_658 | 3 | 3 | 0.000453398 |
| Lupinus albus | Lalb_Chr18 | 5 | CH_lal_659 | 3 | 3 | 0.000453398 |
| Lotus japonicus | chr3 | 5 | CH_lja_245 | 4 | 5 | 0.000000816288 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_1195 | 3 | 6 | 0.00083405 |
| Malus domestica | Chr12 | 5 | CH_mdo_863 | 3 | 3 | 0.0000565905 |
| Manihot esculenta | Chromosome09 | 5 | CH_mes_194 | 5 | 6 | 0.000000000235713 |
| Marchantia polymorpha | scaffold_22 | 5 | CH_mpo_42 | 5 | 9 | 0.00000000042148 |
| Medicago truncatula | scaffold0036 | 5 | CH_mtr_1130 | 3 | 4 | 0.000223671 |
| Medicago truncatula | chr5 | 5 | CH_mtr_606 | 4 | 5 | 0.00000028144 |
| Medicago truncatula | chr8 | 5 | CH_mtr_974 | 3 | 3 | 0.0000559612 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_118 | 5 | 9 | 0.00000000120473 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_337 | 3 | 3 | 0.0000189889 |
| Oryza sativa ssp. japonica | chr07 | 5 | CH_osa_193 | 5 | 9 | 0.00000000353946 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_424 | 4 | 11 | 0.0000196773 |
| Petunia axillaris | Peaxi162Scf00045 | 5 | CH_pax_146 | 4 | 4 | 0.00000000925236 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_154 | 5 | 6 | 0.00000000154763 |
| Prunus persica | Pp01 | 5 | CH_ppe_623 | 3 | 3 | 0.0000889813 |
| Prunus persica | Pp08 | 5 | CH_ppe_624 | 3 | 3 | 0.0000889813 |
| Pisum sativum | chr2LG1 | 5 | CH_psa_164 | 4 | 4 | 0.0000000101143 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_371 | 3 | 3 | 0.0000149143 |
| Phaseolus vulgaris | Chr02 | 5 | CH_pvu_250 | 4 | 4 | 0.000000146858 |
| Phaseolus vulgaris | Chr11 | 5 | CH_pvu_82 | 7 | 9 | 0.0000000000000143447 |
| Quercus lobata | 9 | 5 | CH_qlo_465 | 6 | 9 | 0.0000000000178524 |
| Quercus lobata | 4 | 5 | CH_qlo_798 | 4 | 4 | 0.000000130577 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_368 | 6 | 19 | 0.000000000319851 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_707 | 5 | 26 | 0.00000104606 |
| Striga asiatica | scaffold25 | 5 | CH_sas_259 | 3 | 6 | 0.000949235 |
| Salvia bowleyana | GWHASIU00000004 | 5 | CH_sbo_541 | 4 | 26 | 0.000131426 |
| Salvia bowleyana | GWHASIU00000003 | 5 | CH_sbo_90 | 7 | 9 | 6.60852e-17 |
| Salix brachista | GWHAAZH00000015 | 5 | CH_sbr_385 | 6 | 80 | 0.0000102684 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_2191 | 3 | 7 | 0.000220313 |
| Solanum lycopersicum | SL4.0ch08 | 5 | CH_sly_248 | 4 | 4 | 0.0000000106468 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_544 | 3 | 3 | 0.0000306077 |
| Trochodendron aralioides | group1 | 5 | CH_tar_424 | 5 | 30 | 0.0000130446 |
| Trochodendron aralioides | group2 | 5 | CH_tar_450 | 4 | 11 | 0.0000262623 |
| Tarenaya hassleriana | NW_010965451.1 | 5 | CH_tha_271 | 3 | 4 | 0.000267261 |
| Tarenaya hassleriana | NW_010967707.1 | 5 | CH_tha_53 | 5 | 5 | 0.000000000102798 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_432 | 3 | 3 | 0.0000314078 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 5 | CH_tpr_433 | 3 | 3 | 0.0000314078 |
| Tripterygium wilfordii | NC_052254.1 | 5 | CH_twi_206 | 4 | 4 | 0.000000449442 |
| Tripterygium wilfordii | NC_052236.1 | 5 | CH_twi_434 | 3 | 3 | 0.000244279 |
| Tripterygium wilfordii | NC_052238.1 | 5 | CH_twi_54 | 6 | 6 | 0.00000000000145309 |
| Vigna mungo | CM024074.1 | 5 | CH_vmu_388 | 3 | 3 | 0.000101549 |
| Vigna mungo | CM024076.1 | 5 | CH_vmu_6 | 13 | 25 | 5.8282e-27 |
| Aquilegia oxysepala | CHR01 | 6 | CH_aox_134 | 4 | 4 | 0.0000000556542 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_4 | 9 | 9 | 6.81196e-23 |
| Arabidopsis thaliana | Chr2 | 6 | CH_ath_323 | 5 | 61 | 0.00000819741 |
| Brassica carinata | ChrB06 | 6 | CH_bca_1272 | 3 | 3 | 0.0000629784 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_1385 | 3 | 9 | 0.000607898 |
| Capsicum annuum | PGAv.1.6.scaffold561 | 6 | CH_can_37 | 10 | 11 | 1.29385e-24 |
| Cicer arietinum L. | Ca_LG7_v3 | 6 | CH_car_241 | 4 | 18 | 0.000101636 |
| Coffea canephora | chr5 | 6 | CH_ccan_190 | 4 | 50 | 0.000000206606 |
| Cardamine hirsuta | Chr2 | 6 | CH_chi_432 | 3 | 3 | 0.0000261871 |
| Cucumis melo | chr07 | 6 | CH_cme_253 | 3 | 3 | 0.000017357 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1214 | 6 | CH_cqu_121 | 6 | 7 | 0.000000000000352116 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3035 | 6 | CH_cqu_56 | 8 | 10 | 1.98086e-18 |
| Capsella rubella | scaffold_4 | 6 | CH_cru_375 | 5 | 33 | 0.0000137977 |
| Cucumis sativus L. | chr4 | 6 | CH_csa_299 | 3 | 3 | 0.0000342433 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 6 | CH_eca_567 | 3 | 5 | 0.0000610858 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_650 | 4 | 4 | 0.0000000216301 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_998 | 3 | 3 | 0.0000254862 |
| Erythranthe guttata | scaffold_1 | 6 | CH_egut_166 | 7 | 16 | 0.000000000142342 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_306 | 6 | 21 | 0.00000029082 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_342 | 4 | 4 | 0.00000100136 |
| Erythranthe guttata | scaffold_2 | 6 | CH_egut_43 | 10 | 10 | 1.38852e-22 |
| Erythranthe guttata | scaffold_10 | 6 | CH_egut_638 | 3 | 3 | 0.000416703 |
| Erythranthe guttata | scaffold_13 | 6 | CH_egut_82 | 8 | 9 | 2.56935e-16 |
| Fragaria vesca | Fvb7 | 6 | CH_fve_842 | 3 | 6 | 0.000949157 |
| Gossypium hirsutum | D13 | 6 | CH_ghi_889 | 3 | 3 | 0.0000845729 |
| Glycine max | Gm13 | 6 | CH_gma_388 | 5 | 17 | 0.00000091924 |
| Glycine max | Gm08 | 6 | CH_gma_426 | 6 | 49 | 0.00000236861 |
| Lupinus albus | Lalb_Chr20 | 6 | CH_lal_258 | 4 | 4 | 0.00000101136 |
| Lupinus albus | Lalb_Chr18 | 6 | CH_lal_259 | 4 | 4 | 0.00000101136 |
| Lupinus albus | Lalb_Chr15 | 6 | CH_lal_658 | 3 | 3 | 0.000453398 |
| Lupinus albus | Lalb_Chr18 | 6 | CH_lal_659 | 3 | 3 | 0.000453398 |
| Lotus japonicus | chr3 | 6 | CH_lja_245 | 4 | 5 | 0.000000816288 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_1195 | 3 | 6 | 0.00083405 |
| Malus domestica | Chr12 | 6 | CH_mdo_863 | 3 | 3 | 0.0000565905 |
| Manihot esculenta | Chromosome09 | 6 | CH_mes_194 | 5 | 6 | 0.000000000235713 |
| Marchantia polymorpha | scaffold_22 | 6 | CH_mpo_42 | 5 | 9 | 0.00000000042148 |
| Medicago truncatula | scaffold0036 | 6 | CH_mtr_1130 | 3 | 4 | 0.000223671 |
| Medicago truncatula | chr5 | 6 | CH_mtr_606 | 4 | 5 | 0.00000028144 |
| Medicago truncatula | chr8 | 6 | CH_mtr_974 | 3 | 3 | 0.0000559612 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_118 | 5 | 9 | 0.00000000120473 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_337 | 3 | 3 | 0.0000189889 |
| Oryza sativa ssp. japonica | chr07 | 6 | CH_osa_193 | 5 | 9 | 0.00000000353946 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_424 | 4 | 11 | 0.0000196773 |
| Petunia axillaris | Peaxi162Scf00045 | 6 | CH_pax_146 | 4 | 4 | 0.00000000925236 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_154 | 5 | 6 | 0.00000000154763 |
| Prunus persica | Pp01 | 6 | CH_ppe_623 | 3 | 3 | 0.0000889813 |
| Prunus persica | Pp08 | 6 | CH_ppe_624 | 3 | 3 | 0.0000889813 |
| Pisum sativum | chr2LG1 | 6 | CH_psa_164 | 4 | 4 | 0.0000000101143 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_371 | 3 | 3 | 0.0000149143 |
| Phaseolus vulgaris | Chr02 | 6 | CH_pvu_250 | 4 | 4 | 0.000000146858 |
| Phaseolus vulgaris | Chr11 | 6 | CH_pvu_82 | 7 | 9 | 0.0000000000000143447 |
| Quercus lobata | 9 | 6 | CH_qlo_465 | 6 | 9 | 0.0000000000178524 |
| Quercus lobata | 4 | 6 | CH_qlo_798 | 4 | 4 | 0.000000130577 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_368 | 6 | 19 | 0.000000000319851 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_707 | 5 | 26 | 0.00000104606 |
| Striga asiatica | scaffold25 | 6 | CH_sas_259 | 3 | 6 | 0.000949235 |
| Salvia bowleyana | GWHASIU00000004 | 6 | CH_sbo_541 | 4 | 26 | 0.000131426 |
| Salvia bowleyana | GWHASIU00000003 | 6 | CH_sbo_90 | 7 | 9 | 6.60852e-17 |
| Salix brachista | GWHAAZH00000015 | 6 | CH_sbr_385 | 6 | 80 | 0.0000102684 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_2191 | 3 | 7 | 0.000220313 |
| Solanum lycopersicum | SL4.0ch08 | 6 | CH_sly_248 | 4 | 4 | 0.0000000106468 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_544 | 3 | 3 | 0.0000306077 |
| Trochodendron aralioides | group1 | 6 | CH_tar_424 | 5 | 30 | 0.0000130446 |
| Trochodendron aralioides | group2 | 6 | CH_tar_450 | 4 | 11 | 0.0000262623 |
| Tarenaya hassleriana | NW_010965451.1 | 6 | CH_tha_271 | 3 | 4 | 0.000267261 |
| Tarenaya hassleriana | NW_010967707.1 | 6 | CH_tha_53 | 5 | 5 | 0.000000000102798 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_432 | 3 | 3 | 0.0000314078 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 6 | CH_tpr_433 | 3 | 3 | 0.0000314078 |
| Tripterygium wilfordii | NC_052254.1 | 6 | CH_twi_206 | 4 | 4 | 0.000000449442 |
| Tripterygium wilfordii | NC_052236.1 | 6 | CH_twi_434 | 3 | 3 | 0.000244279 |
| Tripterygium wilfordii | NC_052238.1 | 6 | CH_twi_54 | 6 | 6 | 0.00000000000145309 |
| Vigna mungo | CM024074.1 | 6 | CH_vmu_388 | 3 | 3 | 0.000101549 |
| Vigna mungo | CM024076.1 | 6 | CH_vmu_6 | 13 | 25 | 5.8282e-27 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |