Functional clusters

Information

  • Type InterPro
  • Description Peroxiredoxin-like 2A/B/C

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group15 5 CH_ach_619 2 2 0.000814819
Amborella trichopoda AmTr_v1.0_scaffold00065 5 CH_atr_222 3 3 0.000000189332
Carya illinoinensis Chr09 5 CH_cil_488 3 10 0.00000691183
Corchorus olitorius AWUE01014719.1 5 CH_col_228 2 2 0.000876296
Eucalyptus grandis Chr08 5 CH_egr_1282 2 2 0.000351165
Fragaria vesca Fvb1 5 CH_fve_339 3 4 0.000000208215
Glycine max Gm17 5 CH_gma_820 2 2 0.000379557
Hydrangea macrophylla Hma1.2p1_0111F.1 5 CH_hma_580 2 2 0.000333259
Nelumbo nucifera chr4 5 CH_nnu_511 2 2 0.00028901
Oryza sativa ssp. japonica chr03 5 CH_osa_595 2 2 0.000158437
Pisum sativum chr2LG1 5 CH_psa_691 2 2 0.000521635
Papaver somniferum NC_039362.1 5 CH_pso_627 3 8 0.00000238701
Papaver somniferum NC_039360.1 5 CH_pso_659 3 9 0.00000358032
Phaseolus vulgaris Chr03 5 CH_pvu_547 2 2 0.000220418
Quercus lobata 6 5 CH_qlo_746 3 3 0.0000000399842
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_533 3 3 0.0000000476781
Salix brachista GWHAAZH00000010 5 CH_sbr_667 2 2 0.00063014
Solanum lycopersicum SL4.0ch05 5 CH_sly_821 2 2 0.000352164
Theobroma cacao Chromosome_1 5 CH_tca_692 2 2 0.000439432
Vigna mungo CM024069.1 5 CH_vmu_463 2 2 0.000193842
Actinidia chinensis Lachesis_group15 6 CH_ach_619 2 2 0.000814819
Amborella trichopoda AmTr_v1.0_scaffold00065 6 CH_atr_222 3 3 0.000000189332
Carya illinoinensis Chr09 6 CH_cil_488 3 10 0.00000691183
Corchorus olitorius AWUE01014719.1 6 CH_col_228 2 2 0.000876296
Eucalyptus grandis Chr08 6 CH_egr_1282 2 2 0.000351165
Fragaria x ananassa Fvb1-2 6 CH_fan_367 3 3 0.000000233679
Fragaria vesca Fvb1 6 CH_fve_339 3 4 0.000000208215
Glycine max Gm17 6 CH_gma_820 2 2 0.000379557
Hydrangea macrophylla Hma1.2p1_0111F.1 6 CH_hma_580 2 2 0.000333259
Nelumbo nucifera chr4 6 CH_nnu_511 2 2 0.00028901
Oryza sativa ssp. japonica chr03 6 CH_osa_595 2 2 0.000158437
Pisum sativum chr2LG1 6 CH_psa_691 2 2 0.000521635
Papaver somniferum NC_039362.1 6 CH_pso_627 3 8 0.00000238701
Papaver somniferum NC_039360.1 6 CH_pso_659 3 9 0.00000358032
Phaseolus vulgaris Chr03 6 CH_pvu_547 2 2 0.000220418
Quercus lobata 6 6 CH_qlo_746 3 3 0.0000000399842
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_533 3 3 0.0000000476781
Salix brachista GWHAAZH00000010 6 CH_sbr_667 2 2 0.00063014
Solanum lycopersicum SL4.0ch05 6 CH_sly_821 2 2 0.000352164
Theobroma cacao Chromosome_1 6 CH_tca_692 2 2 0.000439432
Vigna mungo CM024069.1 6 CH_vmu_463 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001