Functional clusters

Information

  • Type InterPro
  • Description Tetratricopeptide repeat protein 5, OB fold domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium hirsutum D04 5 CH_ghi_876 2 2 0.0000801047
Petunia axillaris Peaxi162Scf00159 5 CH_pax_647 2 2 0.000422134
Solanum lycopersicum SL4.0ch02 5 CH_sly_162 4 6 0.0000000000454943
Solanum pennellii Spenn-ch02 5 CH_spe_136 4 9 0.000000000166291
Solanum tuberosum ST4.03ch02 5 CH_stu_280 4 16 0.0000000110136
Solanum tuberosum ST4.03ch02 5 CH_stu_926 2 2 0.000768679
Gossypium hirsutum D04 6 CH_ghi_876 2 2 0.0000801047
Petunia axillaris Peaxi162Scf00159 6 CH_pax_647 2 2 0.000422134
Solanum lycopersicum SL4.0ch02 6 CH_sly_162 4 6 0.0000000000454943
Solanum pennellii Spenn-ch02 6 CH_spe_136 4 9 0.000000000166291
Solanum tuberosum ST4.03ch02 6 CH_stu_280 4 16 0.0000000110136
Solanum tuberosum ST4.03ch02 6 CH_stu_926 2 2 0.000768679

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001