Functional clusters

Information

  • Type InterPro
  • Description DNA ligase 4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC04 5 CH_bca_1717 2 4 0.000384762
Capsicum annuum PGAv.1.6.scaffold285 5 CH_can_537 2 2 0.0000826105
Corylus avellana 3 5 CH_cav_203 3 4 0.0000000352693
Citrullus lanatus CG_Chr11 5 CH_cla_196 2 2 0.0000887115
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_607 2 3 0.000134614
Glycine max Gm09 5 CH_gma_617 2 2 0.000113867
Hydrangea macrophylla Hma1.2p1_0235F.1 5 CH_hma_271 2 2 0.000111086
Magnolia biondii Chr16 5 CH_mbi_1103 2 5 0.000485625
Petunia axillaris Peaxi162Scf00231 5 CH_pax_394 2 2 0.0000703556
Pisum sativum chr1LG6 5 CH_psa_526 2 2 0.00015649
Sequoiadendron giganteum chr5 5 CH_sgi_596 4 5 0.0000000000260123
Solanum lycopersicum SL4.0ch07 5 CH_sly_561 2 2 0.0000586941
Solanum pennellii Spenn-ch07 5 CH_spe_630 2 2 0.000133437
Brassica carinata ChrC04 6 CH_bca_1717 2 4 0.000384762
Capsicum annuum PGAv.1.6.scaffold285 6 CH_can_537 2 2 0.0000826105
Corylus avellana 3 6 CH_cav_203 3 4 0.0000000352693
Citrullus lanatus CG_Chr11 6 CH_cla_196 2 2 0.0000887115
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_607 2 3 0.000134614
Glycine max Gm09 6 CH_gma_617 2 2 0.000113867
Hydrangea macrophylla Hma1.2p1_0235F.1 6 CH_hma_271 2 2 0.000111086
Magnolia biondii Chr16 6 CH_mbi_1103 2 5 0.000485625
Petunia axillaris Peaxi162Scf00231 6 CH_pax_394 2 2 0.0000703556
Pisum sativum chr1LG6 6 CH_psa_526 2 2 0.00015649
Sequoiadendron giganteum chr5 6 CH_sgi_596 4 5 0.0000000000260123
Solanum lycopersicum SL4.0ch07 6 CH_sly_561 2 2 0.0000586941
Solanum pennellii Spenn-ch07 6 CH_spe_630 2 2 0.000133437

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001