Functional clusters
Information
- Type InterPro
- Description Interactor of constitutive active ROPs
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 5 | CH_acertr_902 | 2 | 2 | 0.000422982 |
| Brassica carinata | ChrB01 | 5 | CH_bca_275 | 4 | 4 | 0.000000000600018 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_1226 | 2 | 2 | 0.000898311 |
| Magnolia biondii | Chr14 | 5 | CH_mbi_928 | 2 | 3 | 0.000145698 |
| Medicago truncatula | chr2 | 5 | CH_mtr_568 | 3 | 3 | 0.000000141802 |
| Simmondsia chinensis | GWHAASQ00000021 | 5 | CH_sci_215 | 3 | 8 | 0.0000060864 |
| Acer truncatum | chr3 | 6 | CH_acertr_902 | 2 | 2 | 0.000422982 |
| Brassica carinata | ChrB01 | 6 | CH_bca_275 | 4 | 4 | 0.000000000600018 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_1226 | 2 | 2 | 0.000898311 |
| Magnolia biondii | Chr14 | 6 | CH_mbi_928 | 2 | 3 | 0.000145698 |
| Medicago truncatula | chr2 | 6 | CH_mtr_568 | 3 | 3 | 0.000000141802 |
| Simmondsia chinensis | GWHAASQ00000021 | 6 | CH_sci_215 | 3 | 8 | 0.0000060864 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |