Functional clusters

Information

  • Type InterPro
  • Description WD repeat BOP1/Erb1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 5 CH_amhyb_392 2 2 0.000505051
Amborella trichopoda AmTr_v1.0_scaffold00024 5 CH_atr_587 2 2 0.000476644
Amborella trichopoda AmTr_v1.0_scaffold00007 5 CH_atr_588 2 2 0.000476644
Brassica carinata ChrC01 5 CH_bca_1676 2 2 0.000320646
Brassica napus A05 5 CH_bna_1487 2 3 0.000835246
Coffea canephora chr7 5 CH_ccan_308 2 3 0.0000127767
Lupinus albus Lalb_Chr21 5 CH_lal_412 2 2 0.0000524824
Petunia axillaris Peaxi162Scf00011 5 CH_pax_445 2 2 0.0000703556
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_465 3 3 0.00000000953562
Salvia bowleyana GWHASIU00000004 5 CH_sbo_194 4 8 0.0000000000988835
Solanum pennellii Spenn-ch01 5 CH_spe_562 2 2 0.000044479
Vanilla planifolia CM028155.1 5 CH_vpl_409 2 2 0.000073888
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 6 CH_amhyb_392 2 2 0.000505051
Amborella trichopoda AmTr_v1.0_scaffold00024 6 CH_atr_587 2 2 0.000476644
Amborella trichopoda AmTr_v1.0_scaffold00007 6 CH_atr_588 2 2 0.000476644
Brassica carinata ChrC01 6 CH_bca_1676 2 2 0.000320646
Brassica napus A05 6 CH_bna_1487 2 3 0.000835246
Coffea canephora chr7 6 CH_ccan_308 2 3 0.0000127767
Lupinus albus Lalb_Chr21 6 CH_lal_412 2 2 0.0000524824
Petunia axillaris Peaxi162Scf00011 6 CH_pax_445 2 2 0.0000703556
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_465 3 3 0.00000000953562
Salvia bowleyana GWHASIU00000004 6 CH_sbo_194 4 8 0.0000000000988835
Solanum pennellii Spenn-ch01 6 CH_spe_562 2 2 0.000044479
Vanilla planifolia CM028155.1 6 CH_vpl_409 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001