Functional clusters

Information

  • Type InterPro
  • Description Protein ALWAYS EARLY, plant

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 5 CH_bca_1531 3 23 0.000199995
Corylus avellana 1 5 CH_cav_622 2 2 0.000230008
Ceratophyllum demersum 2 5 CH_cde_293 2 2 0.000236939
Carica papaya supercontig_16 5 CH_cpa_475 2 2 0.000285198
Gossypium hirsutum D13 5 CH_ghi_1195 2 2 0.000560733
Glycine max Gm19 5 CH_gma_931 2 2 0.00079707
Lonicera japonica GWHAAZE00000009 5 CH_lonja_1129 2 5 0.00059882
Malus domestica Chr13 5 CH_mdo_1214 2 2 0.000379212
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_507 3 4 0.0000000381412
Trochodendron aralioides group16 5 CH_tar_756 2 2 0.00036022
Vanilla planifolia CM028150.1 5 CH_vpl_320 3 18 0.0000267045
Zea mays 3 5 CH_zma_163 3 4 0.0000000627446
Brassica carinata ChrC05 6 CH_bca_1531 3 23 0.000199995
Corylus avellana 1 6 CH_cav_622 2 2 0.000230008
Ceratophyllum demersum 2 6 CH_cde_293 2 2 0.000236939
Cucumis melo chr06 6 CH_cme_443 2 3 0.000600367
Carica papaya supercontig_16 6 CH_cpa_475 2 2 0.000285198
Gossypium hirsutum D13 6 CH_ghi_1195 2 2 0.000560733
Glycine max Gm19 6 CH_gma_931 2 2 0.00079707
Lonicera japonica GWHAAZE00000009 6 CH_lonja_1129 2 5 0.00059882
Malus domestica Chr13 6 CH_mdo_1214 2 2 0.000379212
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_507 3 4 0.0000000381412
Trochodendron aralioides group16 6 CH_tar_756 2 2 0.00036022
Vanilla planifolia CM028150.1 6 CH_vpl_320 3 18 0.0000267045
Zea mays 3 6 CH_zma_163 3 4 0.0000000627446

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001