Functional clusters

Information

  • Type InterPro
  • Description SCAR/WAVE family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 5 CH_acertr_280 3 3 0.00000007455
Daucus carota DCARv2_Chr8 5 CH_dca_695 2 2 0.000637775
Davidia involucrata GWHABJS00000020 5 CH_din_239 3 3 0.0000000750394
Davidia involucrata GWHABJS00000015 5 CH_din_820 2 2 0.000750188
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_852 2 3 0.000807658
Erythranthe guttata scaffold_8 5 CH_egut_601 2 2 0.000218444
Gossypium raimondii Chr11 5 CH_gra_629 2 2 0.000536107
Malus domestica Chr05 5 CH_mdo_1321 2 2 0.000568817
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_1139 2 2 0.000119596
Sequoiadendron giganteum chr1 5 CH_sgi_2115 2 2 0.000146145
Trochodendron aralioides group7 5 CH_tar_965 2 2 0.000900549
Vanilla planifolia CM028153.1 5 CH_vpl_543 2 2 0.000221664
Vitis vinifera chr8 5 CH_vvi_618 2 2 0.000228189
Acer truncatum chr10 6 CH_acertr_280 3 3 0.00000007455
Daucus carota DCARv2_Chr8 6 CH_dca_695 2 2 0.000637775
Davidia involucrata GWHABJS00000020 6 CH_din_239 3 3 0.0000000750394
Davidia involucrata GWHABJS00000015 6 CH_din_820 2 2 0.000750188
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_852 2 3 0.000807658
Erythranthe guttata scaffold_8 6 CH_egut_601 2 2 0.000218444
Gossypium raimondii Chr11 6 CH_gra_629 2 2 0.000536107
Malus domestica Chr05 6 CH_mdo_1321 2 2 0.000568817
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_1139 2 2 0.000119596
Sequoiadendron giganteum chr1 6 CH_sgi_2115 2 2 0.000146145
Trochodendron aralioides group7 6 CH_tar_965 2 2 0.000900549
Vanilla planifolia CM028153.1 6 CH_vpl_543 2 2 0.000221664
Vitis vinifera chr8 6 CH_vvi_618 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001