Functional clusters

Information

  • Type InterPro
  • Description Sda1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 5 CH_acertr_608 2 2 0.000070497
Actinidia chinensis Lachesis_group15 5 CH_ach_375 2 2 0.000162964
Amborella trichopoda AmTr_v1.0_scaffold00049 5 CH_atr_400 2 2 0.0000794407
Medicago truncatula chr4 5 CH_mtr_1085 2 2 0.000123259
Sapria himalayana scaffold23_8152026 5 CH_shi_316 2 2 0.0000571804
Trochodendron aralioides group12 5 CH_tar_528 2 2 0.0000600366
Utricularia gibba unitig_22 5 CH_ugi_181 2 2 0.0000820479
Vanilla planifolia CM028152.1 5 CH_vpl_573 3 19 0.000277089
Acer truncatum chr11 6 CH_acertr_608 2 2 0.000070497
Actinidia chinensis Lachesis_group15 6 CH_ach_375 2 2 0.000162964
Amborella trichopoda AmTr_v1.0_scaffold00049 6 CH_atr_400 2 2 0.0000794407
Medicago truncatula chr4 6 CH_mtr_1085 2 2 0.000123259
Sapria himalayana scaffold23_8152026 6 CH_shi_316 2 2 0.0000571804
Trochodendron aralioides group12 6 CH_tar_528 2 2 0.0000600366
Utricularia gibba unitig_22 6 CH_ugi_181 2 2 0.0000820479
Vanilla planifolia CM028152.1 6 CH_vpl_573 3 19 0.000277089

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001