Functional clusters

Information

  • Type InterPro
  • Description Protein strawberry notch

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group19 5 CH_ach_27 4 4 0.00000000000240456
Coffea canephora chr0 5 CH_ccan_373 2 12 0.0000425888
Citrus clementina scaffold_9 5 CH_ccl_545 2 2 0.0000820311
Carya illinoinensis Chr15 5 CH_cil_580 2 2 0.0000619828
Carica papaya supercontig_32 5 CH_cpa_68 4 10 0.000000000541197
Daucus carota DCARv2_Chr4 5 CH_dca_542 2 2 0.000191333
Eutrema salsugineum scaffold_15 5 CH_esa_415 2 2 0.00022845
Lonicera japonica GWHAAZE00000002 5 CH_lonja_1134 2 5 0.00059882
Magnolia biondii Chr18 5 CH_mbi_383 3 6 0.0000000707565
Nelumbo nucifera chr7 5 CH_nnu_432 2 3 0.000144502
Olea europaea chr13 5 CH_oeu_544 2 2 0.000320273
Olea europaea chr19 5 CH_oeu_545 2 2 0.000320273
Oryza sativa ssp. japonica chr08 5 CH_osa_244 3 4 0.0000000669379
Quercus lobata 4 5 CH_qlo_1658 2 3 0.00046464
Sequoiadendron giganteum chr8 5 CH_sgi_559 4 5 0.00000000000867093
Vigna mungo CM024076.1 5 CH_vmu_76 4 8 0.0000000000566483
Actinidia chinensis Lachesis_group19 6 CH_ach_27 4 4 0.00000000000240456
Coffea canephora chr0 6 CH_ccan_373 2 12 0.0000425888
Citrus clementina scaffold_9 6 CH_ccl_545 2 2 0.0000820311
Carya illinoinensis Chr15 6 CH_cil_580 2 2 0.0000619828
Carica papaya supercontig_32 6 CH_cpa_68 4 10 0.000000000541197
Daucus carota DCARv2_Chr4 6 CH_dca_542 2 2 0.000191333
Eutrema salsugineum scaffold_15 6 CH_esa_415 2 2 0.00022845
Lonicera japonica GWHAAZE00000002 6 CH_lonja_1134 2 5 0.00059882
Magnolia biondii Chr18 6 CH_mbi_383 3 6 0.0000000707565
Nelumbo nucifera chr7 6 CH_nnu_432 2 3 0.000144502
Olea europaea chr13 6 CH_oeu_544 2 2 0.000320273
Olea europaea chr19 6 CH_oeu_545 2 2 0.000320273
Oryza sativa ssp. japonica chr08 6 CH_osa_244 3 4 0.0000000669379
Quercus lobata 4 6 CH_qlo_1658 2 3 0.00046464
Sequoiadendron giganteum chr8 6 CH_sgi_559 4 5 0.00000000000867093
Vigna mungo CM024076.1 6 CH_vmu_76 4 8 0.0000000000566483

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001