Functional clusters
Information
- Type InterPro
- Description Ribosomal RNA assembly KRR1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cicer arietinum L. | Ca_LG2_v3 | 5 | CH_car_223 | 2 | 2 | 0.0000778301 |
| Ceratophyllum demersum | 5 | 5 | CH_cde_430 | 2 | 2 | 0.000473878 |
| Cardamine hirsuta | Chr6 | 5 | CH_chi_556 | 3 | 47 | 0.000116031 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_744 | 3 | 3 | 0.00000162106 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_893 | 3 | 5 | 0.0000162031 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_807 | 3 | 3 | 0.00000000355983 |
| Utricularia gibba | unitig_46 | 5 | CH_ugi_173 | 2 | 2 | 0.0000820479 |
| Cicer arietinum L. | Ca_LG2_v3 | 6 | CH_car_223 | 2 | 2 | 0.0000778301 |
| Ceratophyllum demersum | 5 | 6 | CH_cde_430 | 2 | 2 | 0.000473878 |
| Cardamine hirsuta | Chr6 | 6 | CH_chi_556 | 3 | 47 | 0.000116031 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_744 | 3 | 3 | 0.00000162106 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_893 | 3 | 5 | 0.0000162031 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_807 | 3 | 3 | 0.00000000355983 |
| Utricularia gibba | unitig_46 | 6 | CH_ugi_173 | 2 | 2 | 0.0000820479 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |