Functional clusters

Information

  • Type InterPro
  • Description Shikimate dehydrogenase family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 5 CH_acertr_29 6 6 1.09735e-18
Actinidia chinensis Lachesis_group19 5 CH_ach_612 2 2 0.000814819
Carpinus fangiana Cfa02 5 CH_cfa_586 2 3 0.000681569
Nelumbo nucifera chr4 5 CH_nnu_203 3 5 0.000000139203
Salvia bowleyana GWHASIU00000006 5 CH_sbo_659 2 2 0.000272988
Sequoiadendron giganteum chr10 5 CH_sgi_2460 2 2 0.000487151
Utricularia gibba unitig_37 5 CH_ugi_171 2 2 0.0000820479
Acer truncatum chr2 6 CH_acertr_29 6 6 1.09735e-18
Actinidia chinensis Lachesis_group19 6 CH_ach_612 2 2 0.000814819
Carpinus fangiana Cfa02 6 CH_cfa_586 2 3 0.000681569
Nelumbo nucifera chr4 6 CH_nnu_203 3 5 0.000000139203
Salvia bowleyana GWHASIU00000006 6 CH_sbo_659 2 2 0.000272988
Sequoiadendron giganteum chr10 6 CH_sgi_2460 2 2 0.000487151
Utricularia gibba unitig_37 6 CH_ugi_171 2 2 0.0000820479

Available child term results

Ontology identifier Description Number of clusters
IPR011342 Shikimate dehydrogenase 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001