Functional clusters

Information

  • Type InterPro
  • Description Shikimate dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 5 CH_aar_266 2 2 0.0000912326
Amborella trichopoda AmTr_v1.0_scaffold00057 5 CH_atr_152 3 3 0.00000000946662
Brassica carinata ChrC09 5 CH_bca_1936 2 3 0.000641272
Capsella rubella scaffold_3 5 CH_cru_440 2 2 0.0000731154
Aethionema arabicum LG-5 6 CH_aar_266 2 2 0.0000912326
Amborella trichopoda AmTr_v1.0_scaffold00057 6 CH_atr_152 3 3 0.00000000946662
Brassica carinata ChrC09 6 CH_bca_1936 2 3 0.000641272
Capsella rubella scaffold_3 6 CH_cru_440 2 2 0.0000731154

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001