Functional clusters

Information

  • Type InterPro
  • Description NYN domain, limkain-b1-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_8 5 CH_aly_490 3 3 0.000181153
Arabidopsis thaliana Chr3 5 CH_ath_444 4 56 0.000124255
Arabidopsis thaliana Chr3 5 CH_ath_486 4 63 0.000201236
Brassica carinata ChrB02 5 CH_bca_2078 3 5 0.000859523
Brassica carinata ChrC07 5 CH_bca_890 4 7 0.00000285933
Brassica napus C01 5 CH_bna_1328 3 4 0.000433658
Brassica napus C08 5 CH_bna_542 4 5 0.000000533261
Brassica oleracea C1 5 CH_bol_707 3 4 0.000279789
Brassica rapa A09 5 CH_bra_312 3 3 0.0000233231
Capsicum annuum PGAv.1.6.scaffold497 5 CH_can_850 2 2 0.000826105
Cardamine hirsuta Chr8 5 CH_chi_127 5 5 0.0000000000168284
Helianthus annuus HanXRQChr13 5 CH_han_826 3 11 0.0000443082
Sapria himalayana scaffold26_7557582 5 CH_shi_546 2 2 0.000571804
Solanum pennellii Spenn-ch02 5 CH_spe_297 3 3 0.000000166188
Solanum tuberosum ST4.03ch02 5 CH_stu_198 4 4 0.0000000000847881
Arabidopsis lyrata scaffold_8 6 CH_aly_490 3 3 0.000181153
Arabidopsis thaliana Chr3 6 CH_ath_444 4 56 0.000124255
Arabidopsis thaliana Chr3 6 CH_ath_486 4 63 0.000201236
Brassica carinata ChrB02 6 CH_bca_2078 3 5 0.000859523
Brassica carinata ChrC07 6 CH_bca_890 4 7 0.00000285933
Brassica napus C01 6 CH_bna_1328 3 4 0.000433658
Brassica napus C08 6 CH_bna_542 4 5 0.000000533261
Brassica oleracea C1 6 CH_bol_707 3 4 0.000279789
Brassica rapa A09 6 CH_bra_312 3 3 0.0000233231
Capsicum annuum PGAv.1.6.scaffold497 6 CH_can_850 2 2 0.000826105
Cardamine hirsuta Chr8 6 CH_chi_127 5 5 0.0000000000168284
Helianthus annuus HanXRQChr13 6 CH_han_826 3 11 0.0000443082
Sapria himalayana scaffold26_7557582 6 CH_shi_546 2 2 0.000571804
Solanum pennellii Spenn-ch02 6 CH_spe_297 3 3 0.000000166188
Solanum tuberosum ST4.03ch02 6 CH_stu_198 4 4 0.0000000000847881

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001