Functional Clusters
Cluster information
- Cluster identifier CH_ath_486
- Chromosome Chr3
- E-value 0.000201236
- Data type InterPro
- Data identifier IPR021139
- Data description NYN domain, limkain-b1-type
-
Overview
Clusters table overview
Clusters chromosomal overview
Gene Family Statistics
| Gene family | Num genes total | Num genes species | Num genes cluster | Num species |
|---|---|---|---|---|
| HOM05D000016 | 7260 | 62 | 2 | 100 |
| HOM05D000086 | 3623 | 38 | 1 | 98 |
| HOM05D000121 | 2804 | 16 | 1 | 100 |
| HOM05D000524 | 1038 | 9 | 3 | 100 |
| HOM05D000950 | 632 | 5 | 1 | 96 |
| HOM05D001456 | 434 | 11 | 3 | 92 |
| HOM05D001737 | 373 | 4 | 1 | 100 |
| HOM05D002041 | 325 | 6 | 1 | 96 |
| HOM05D002825 | 245 | 5 | 2 | 88 |
| HOM05D002904 | 238 | 3 | 1 | 99 |
| HOM05D004070 | 173 | 3 | 1 | 93 |
| HOM05D006418 | 124 | 1 | 1 | 97 |
| HOM05D010965 | 19 | 2 | 1 | 7 |
| HOM05D183918 | 1 | 1 | 1 | 1 |
Gene Information
| In cluster | Gene id | Gene type | Gene family |
|---|---|---|---|
| X | AT3G09515 | RNA gene | |
| X | AT3G09525 | RNA gene | |
| X | AT3G09545 | RNA gene | |
| X | AT3G09555 | RNA gene | |
| V | AT3G60940 | Coding gene | HOM05D001456 |
| X | AT3G60950 | Coding gene | HOM05D000524 |
| X | AT3G60955 | Pseudo gene | |
| X | AT3G60957 | Pseudo gene | |
| X | AT3G60960 | Coding gene | HOM05D002825 |
| X | AT3G60961 | Coding gene | HOM05D001737 |
| X | AT3G60965 | Transposon | |
| X | AT3G60966 | Coding gene | HOM05D000086 |
| X | AT3G60970 | Coding gene | HOM05D000121 |
| X | AT3G60972 | RNA gene | |
| X | AT3G60975 | Coding gene | HOM05D183918 |
| X | AT3G60980 | Coding gene | HOM05D002825 |
| X | AT3G60990 | Coding gene | HOM05D002041 |
| X | AT3G61010 | Coding gene | HOM05D004070 |
| X | AT3G61020 | Pseudo gene | |
| V | AT3G61028 | Coding gene | HOM05D001456 |
| X | AT3G61030 | Coding gene | HOM05D000524 |
| X | AT3G61035 | Coding gene | HOM05D000016 |
| X | AT3G61040 | Coding gene | HOM05D000016 |
| X | AT3G61050 | Coding gene | HOM05D000524 |
| X | AT3G61060 | Coding gene | HOM05D000950 |
| X | AT3G61070 | Coding gene | HOM05D002904 |
| X | AT3G61080 | Coding gene | HOM05D006418 |
| V | AT3G61090 | Coding gene | HOM05D001456 |
| V | AT3G61100 | Coding gene | HOM05D010965 |
| X | AT3TE91750 | Transposon | |
| X | AT3TE91780 | Transposon | |
| X | AT3TE91790 | Transposon | |
| X | AT3TE91810 | Transposon | |
| X | AT3TE91815 | Transposon | |
| X | AT3TE91820 | Transposon | |
| X | AT3TE91825 | Transposon | |
| X | AT3TE91830 | Transposon | |
| X | AT3TE91835 | Transposon | |
| X | AT3TE91840 | Transposon | |
| X | AT3TE91845 | Transposon | |
| X | AT3TE91850 | Transposon | |
| X | AT3TE91855 | Transposon | |
| X | AT3TE91865 | Transposon | |
| X | AT3TE91870 | Transposon | |
| X | AT3TE91875 | Transposon | |
| X | AT3TE91920 | Transposon | |
| X | AT3TE91925 | Transposon | |
| X | AT3TE91930 | Transposon | |
| X | AT3TE91940 | Transposon | |
| X | AT3TE91945 | Transposon | |
| X | AT3TE91950 | Transposon | |
| X | AT3TE91990 | Transposon | |
| X | AT3TE91995 | Transposon | |
| X | AT3TE92000 | Transposon | |
| X | AT3TE92005 | Transposon | |
| X | AT3TE92010 | Transposon | |
| X | AT3TE92015 | Transposon | |
| X | AT3TE92020 | Transposon | |
| X | AT3TE92025 | Transposon | |
| X | AT3TE92030 | Transposon | |
| X | AT3TE92035 | Transposon | |
| X | AT3TE92070 | Transposon | |
| X | ath-miR1888b | RNA gene |