Functional clusters

Information

  • Type InterPro
  • Description RQC domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corchorus olitorius AWUE01014740.1 5 CH_col_225 2 2 0.000876296
Cucumis sativus L. chr4 5 CH_csa_182 3 3 0.000000104528
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1242 2 2 0.000239192
Salix brachista GWHAAZH00000003 5 CH_sbr_164 4 10 0.000000000787978
Sequoiadendron giganteum chr3 5 CH_sgi_2278 2 2 0.000292291
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_771 2 2 0.000756974
Cucumis melo chr08 6 CH_cme_243 3 11 0.00000800627
Corchorus olitorius AWUE01014740.1 6 CH_col_225 2 2 0.000876296
Cucumis sativus L. chr4 6 CH_csa_182 3 3 0.000000104528
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1242 2 2 0.000239192
Salix brachista GWHAAZH00000003 6 CH_sbr_164 4 10 0.000000000787978
Sequoiadendron giganteum chr3 6 CH_sgi_2278 2 2 0.000292291
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_771 2 2 0.000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001